RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PDCD7Q8N8D1 485 aaKnown RBP19.47■□□□□ 0.71
CLN6-212ENST00000636020 ZNF513Q8N8E2 541 aaPredicted RBP19.47■□□□□ 0.71
CLN6-212ENST00000636020 MSTO1Q9BUK6 570 aa19.47■□□□□ 0.71
CLN6-212ENST00000636020 ASB7Q9H672 318 aa19.47■□□□□ 0.71
CLN6-212ENST00000636020 HCN2Q9UL51 889 aa19.47■□□□□ 0.71
CLN6-212ENST00000636020 C2CD2Q9Y426 696 aa19.47■□□□□ 0.71
CLN6-212ENST00000636020 MYO18BQ8IUG5 2567 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 MGAQ8IWI9 3026 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 PP2D1A8MPX8 630 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 HNRNPDLO14979 420 aaKnown RBP19.46■□□□□ 0.71
CLN6-212ENST00000636020 ADH1CP00326 375 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 ZNF883P0CG24 379 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 ADH5P11766 374 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 HOXB2P14652 356 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 MAOBP27338 520 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 CCDC142Q17RM4 750 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 SV2CQ496J9 727 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 CFAP221Q4G0U5 840 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 INTS6LQ5JSJ4 861 aaKnown RBP19.46■□□□□ 0.71
CLN6-212ENST00000636020 DBX2Q6ZNG2 339 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 PDCL2Q8N4E4 241 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 NSUN7Q8NE18 718 aaKnown RBP19.46■□□□□ 0.71
CLN6-212ENST00000636020 CDC6Q99741 560 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 RNF38Q9H0F5 515 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 IL21RQ9HBE5 538 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 CD248Q9HCU0 757 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 GTF3C4Q9UKN8 822 aa19.46■□□□□ 0.71
CLN6-212ENST00000636020 HECTD1Q9ULT8 2610 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 TBC1D3BA6NDS4 549 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 H0YCG3 227 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 J3QKU1 62 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 SCAMP3O14828 347 aaKnown RBP19.45■□□□□ 0.7
CLN6-212ENST00000636020 NDUFV2P19404 249 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 ACAT1P24752 427 aaKnown RBP19.45■□□□□ 0.7
CLN6-212ENST00000636020 WDR45BQ5MNZ6 344 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 TTC38Q5R3I4 469 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 KRT79Q5XKE5 535 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 SCN4BQ8IWT1 228 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 FOXJ1Q92949 421 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 KIF2CQ99661 725 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 PRDM16Q9HAZ2 1276 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 TM7SF3Q9NS93 570 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 DDX43Q9NXZ2 648 aaKnown RBP19.45■□□□□ 0.7
CLN6-212ENST00000636020 L1RE1Q9UN81 338 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 KNL1Q8NG31 2342 aa19.45■□□□□ 0.7
CLN6-212ENST00000636020 CABIN1Q9Y6J0 2220 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 FAM149AA5PLN7 773 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 JAK2O60674 1132 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 NDUFS2O75306 463 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
CLN6-212ENST00000636020 NTSR1P30989 418 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 WASP42768 502 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 SLC39A4Q6P5W5 647 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 MIB1Q86YT6 1006 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 SPATA2LQ8IUW3 424 aaPredicted RBP19.44■□□□□ 0.7
CLN6-212ENST00000636020 ETFBKMTQ8IXQ9 262 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 DNASE2BQ8WZ79 361 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 FUBP3Q96I24 572 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLN6-212ENST00000636020 MMTAG2Q9BU76 263 aaKnown RBP19.44■□□□□ 0.7
CLN6-212ENST00000636020 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 GAREM1Q9H706 876 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 CD93Q9NPY3 652 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 TRPM5Q9NZQ8 1165 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 LARSQ9P2J5 1176 aaKnown RBP19.44■□□□□ 0.7
CLN6-212ENST00000636020 CPQQ9Y646 472 aa19.44■□□□□ 0.7
CLN6-212ENST00000636020 A0A1B0GTW7 788 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 E9PAM4 449 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 ZBTB24O43167 697 aaPredicted RBP19.43■□□□□ 0.7
CLN6-212ENST00000636020 OLFM2O95897 454 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 MAGEA11P43364 429 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 ACOT2P49753 483 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 GUCY1B3Q02153 619 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 SMAD1Q15797 465 aaKnown RBP19.43■□□□□ 0.7
CLN6-212ENST00000636020 LY6G5CQ5SRR4 150 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 SYT2Q8N9I0 419 aaPredicted RBP19.43■□□□□ 0.7
CLN6-212ENST00000636020 RHBDD1Q8TEB9 315 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 IPO4Q8TEX9 1081 aaKnown RBP19.43■□□□□ 0.7
CLN6-212ENST00000636020 GTF3C6Q969F1 213 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 SMPD4Q9NXE4 827 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 CFAP97Q9P2B7 532 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 FNDC3AQ9Y2H6 1198 aaKnown RBP19.43■□□□□ 0.7
CLN6-212ENST00000636020 PCDHGB2Q9Y5G2 931 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 SPTA1P02549 2419 aa19.43■□□□□ 0.7
CLN6-212ENST00000636020 ZNF840PA6NDX5 716 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 GOLGA8CPA6NN73 597 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 CILPO75339 1184 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 MYL7Q01449 175 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 BNC1Q01954 994 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 GAD2Q05329 585 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 ME3Q16798 604 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 NAT16Q8N8M0 369 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 SPATA17Q96L03 361 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 ZNF560Q96MR9 790 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 TBC1D14Q9P2M4 693 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 DEC1Q9P2X7 70 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 STARD13Q9Y3M8 1113 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 NFE2L3Q9Y4A8 694 aa19.42■□□□□ 0.7
CLN6-212ENST00000636020 NPHP3-ACAD11A0A0J9YXS1 232 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 FLRT2O43155 660 aa19.41■□□□□ 0.7
CLN6-212ENST00000636020 TULP3O75386 442 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms