RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 PPP3CCP48454 512 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 SLC5A3P53794 718 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 ZXDAP98168 799 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 TAF10Q12962 218 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 CNGA2Q16280 664 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 ARHGAP44Q17R89 818 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 PKDCCQ504Y2 493 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 FKBP15Q5T1M5 1219 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 TXNDC8Q6A555 127 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 GPRIN1Q7Z2K8 1008 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 LUZP1Q86V48 1076 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 TTC30AQ86WT1 665 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 ARID3BQ8IVW6 561 aaPredicted RBP10.29□□□□□ -0.76
LINC00339-210ENST00000635675 CMTM8Q8IZV2 173 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 MRPS31Q92665 395 aaKnown RBP10.29□□□□□ -0.76
LINC00339-210ENST00000635675 EDAQ92838 391 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 ELSPBP1Q96BH3 223 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 NAA15Q9BXJ9 866 aaKnown RBP10.29□□□□□ -0.76
LINC00339-210ENST00000635675 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 SLITRK6Q9H5Y7 841 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 EPHX3Q9H6B9 360 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 ZFP14Q9HCL3 533 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 TSPAN16Q9UKR8 245 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 SIK3Q9Y2K2 1263 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 PATJQ8NI35 1801 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 ANAPC1Q9H1A4 1944 aa10.29□□□□□ -0.76
LINC00339-210ENST00000635675 UCHL3P15374 230 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 RFX1P22670 979 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 BRD2P25440 801 aaKnown RBP10.28□□□□□ -0.76
LINC00339-210ENST00000635675 KLK7P49862 253 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 UBXN1Q04323 297 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 GSE1Q14687 1217 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 STILQ15468 1287 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 GOLGA7BQ2TAP0 167 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 RAB41Q5JT25 222 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 SNX30Q5VWJ9 437 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 UBALD2Q8IYN6 164 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 FAM71AQ8IYT1 594 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 MAB21L3Q8N8X9 362 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 OVCA2Q8WZ82 227 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 FBXO32Q969P5 355 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 E2F7Q96AV8 911 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 RSPRY1Q96DX4 576 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 ERGIC2Q96RQ1 377 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 KXD1Q9BQD3 176 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 LSM14BQ9BX40 385 aaKnown RBP10.28□□□□□ -0.76
LINC00339-210ENST00000635675 GANQ9H2C0 597 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 SMOC2Q9H3U7 446 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 TSPY26PQ9H489 355 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 FBXO44Q9H4M3 255 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 ACP6Q9NPH0 428 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 RTN4Q9NQC3 1192 aaKnown RBP10.28□□□□□ -0.76
LINC00339-210ENST00000635675 TRPM5Q9NZQ8 1165 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 CHORDC1Q9UHD1 332 aaPredicted RBP10.28□□□□□ -0.76
LINC00339-210ENST00000635675 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC00339-210ENST00000635675 USP3Q9Y6I4 520 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 NCANO14594 1321 aa10.28□□□□□ -0.76
LINC00339-210ENST00000635675 TRIOO75962 3097 aa10.27□□□□□ -0.76
LINC00339-210ENST00000635675 C2orf78A6NCI8 922 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 TULP2O00295 520 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 XPO1O14980 1071 aaKnown RBP10.27□□□□□ -0.77
LINC00339-210ENST00000635675 CYP26A1O43174 497 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 NARSO43776 548 aaKnown RBP10.27□□□□□ -0.77
LINC00339-210ENST00000635675 PRAMEF12O95522 483 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 ZDHHC11BP0C7U3 371 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 PFKLP17858 780 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 CLCN1P35523 988 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 USP8P40818 1118 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 PGFP49763 221 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 KIF11P52732 1056 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 BCAT1P54687 386 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 SLC8A3P57103 927 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 PDE4CQ08493 712 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 BST2Q10589 180 aaKnown RBP10.27□□□□□ -0.77
LINC00339-210ENST00000635675 IFRD2Q12894 506 aaPredicted RBP10.27□□□□□ -0.77
LINC00339-210ENST00000635675 DRAP1Q14919 205 aaPredicted RBP10.27□□□□□ -0.77
LINC00339-210ENST00000635675 SYCP1Q15431 976 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 LRSAM1Q6UWE0 723 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 GAS2L3Q86XJ1 694 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 PDZD8Q8NEN9 1154 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 UBA3Q8TBC4 463 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 SLC35F5Q8WV83 523 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 ZNF606Q8WXB4 792 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 USP13Q92995 863 aaPredicted RBP10.27□□□□□ -0.77
LINC00339-210ENST00000635675 NAP1L5Q96NT1 182 aaPredicted RBP10.27□□□□□ -0.77
LINC00339-210ENST00000635675 LRRC3BQ96PB8 259 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 SLC22A12Q96S37 553 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 CYP2S1Q96SQ9 504 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 STK33Q9BYT3 514 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 OBP2AQ9NY56 170 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 HESX1Q9UBX0 185 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 DUSP12Q9UNI6 340 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 SCML2Q9UQR0 700 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 FHOD1Q9Y613 1164 aa10.27□□□□□ -0.77
LINC00339-210ENST00000635675 NUP210Q8TEM1 1887 aaPredicted RBP10.27□□□□□ -0.77
LINC00339-210ENST00000635675 TECTAO75443 2155 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 A0A1B0GTH6 734 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms