RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 CTNNA3Q9UI47 895 aa8.17□□□□□ -1.1
LINC01108-202ENST00000635227 USP15Q9Y4E8 981 aaPredicted RBP8.17□□□□□ -1.1
LINC01108-202ENST00000635227 C4BP0C0L5 1744 aa8.17□□□□□ -1.1
LINC01108-202ENST00000635227 MAST2Q6P0Q8 1798 aa8.17□□□□□ -1.1
LINC01108-202ENST00000635227 CCDC88AQ3V6T2 1871 aa8.17□□□□□ -1.1
LINC01108-202ENST00000635227 FSD2A1L4K1 749 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 AP1G1O43747 822 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 RECQL4O94761 1208 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 CD1AP06126 327 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 CSF1RP07333 972 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 UQCRFS1P1P0C7P4 283 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 MALP21145 153 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 NR4A1P22736 598 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 RPS6KB1P23443 525 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 SNAPC2Q13487 334 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 PPP2R5AQ15172 486 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 ATP2B3Q16720 1220 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 RIC1Q4ADV7 1423 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 PDCD4Q53EL6 469 aaKnown RBP8.16□□□□□ -1.1
LINC01108-202ENST00000635227 MROH5Q6ZUA9 1318 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 MYH14Q7Z406 1995 aaKnown RBP8.16□□□□□ -1.1
LINC01108-202ENST00000635227 GDF7Q7Z4P5 450 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 GRAMD1CQ8IYS0 662 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 PASKQ96RG2 1323 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 DCLRE1CQ96SD1 692 aaKnown RBP8.16□□□□□ -1.1
LINC01108-202ENST00000635227 IL25Q9H293 177 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 ANLNQ9NQW6 1124 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 RNF181Q9P0P0 153 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 ZBTB1Q9Y2K1 713 aa8.16□□□□□ -1.1
LINC01108-202ENST00000635227 MYO5AQ9Y4I1 1855 aaKnown RBP8.15□□□□□ -1.1
LINC01108-202ENST00000635227 RTL9Q8NET4 1388 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 GOLIM4O00461 696 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 STX6O43752 255 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 TAF5LO75529 589 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 OFD1O75665 1012 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 HMGB2P26583 209 aaKnown RBP8.15□□□□□ -1.1
LINC01108-202ENST00000635227 DEFB115Q30KQ5 88 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 AGAP9Q5VTM2 703 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 IGFL4Q6B9Z1 124 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 LDHAL6AQ6ZMR3 332 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 EPM2AIP1Q7L775 607 aaPredicted RBP8.15□□□□□ -1.1
LINC01108-202ENST00000635227 ZFPM1Q8IX07 1006 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 CHPFQ8IZ52 775 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 ZNF276Q8N554 614 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 RGMAQ96B86 450 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 AIFM3Q96NN9 605 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 FAM193BQ96PV7 902 aaPredicted RBP8.15□□□□□ -1.1
LINC01108-202ENST00000635227 NEK1Q96PY6 1258 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 MAP3K14Q99558 947 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 GRPEL1Q9HAV7 217 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 SLC2A4RGQ9NR83 387 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 PCDHA3Q9Y5H8 950 aa8.15□□□□□ -1.1
LINC01108-202ENST00000635227 CDHR4A6H8M9 788 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 GLTPD2A6NH11 291 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 RNF113AO15541 343 aaKnown RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 LETM1O95202 739 aaPredicted RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 FTLP02792 175 aaPredicted RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 ALAS1P13196 640 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 SLC5A1P13866 664 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 LPOP22079 712 aaPredicted RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 ZFP36P26651 326 aaKnown RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 MAP2K6P52564 334 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 NOGQ13253 232 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 TUBA3CQ13748 450 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 LSM12Q3MHD2 195 aaKnown RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 CCDC152Q4G0S7 254 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 FLYWCH1Q4VC44 716 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 PABPC1LQ4VXU2 614 aaKnown RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 FNDC7Q5VTL7 733 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 TUBA3EQ6PEY2 450 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 DBX2Q6ZNG2 339 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 ZNF34Q8IZ26 560 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 C3orf20Q8ND61 904 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 SLC25A43Q8WUT9 341 aaPredicted RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 UTP14AQ9BVJ6 771 aaKnown RBP8.14□□□□□ -1.11
LINC01108-202ENST00000635227 ZNF341Q9BYN7 854 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 LMBRD1Q9NUN5 540 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 TCEAL9Q9UHQ7 104 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 TIAM2Q8IVF5 1701 aa8.14□□□□□ -1.11
LINC01108-202ENST00000635227 C4AP0C0L4 1744 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 NT5C1B-RDH14C9J2C7 533 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 F2RL2O00254 374 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 RPS6KA4O75676 772 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 NCR1O76036 304 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 ALDH2P05091 517 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 GPTP24298 496 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 GJB2P29033 226 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 IGHMBP2P38935 993 aaKnown RBP8.13□□□□□ -1.11
LINC01108-202ENST00000635227 CRKLP46109 303 aaKnown RBP8.13□□□□□ -1.11
LINC01108-202ENST00000635227 EIF5P55010 431 aaKnown RBP8.13□□□□□ -1.11
LINC01108-202ENST00000635227 HMGN5P82970 282 aaKnown RBP8.13□□□□□ -1.11
LINC01108-202ENST00000635227 PUM3Q15397 648 aaKnown RBP8.13□□□□□ -1.11
LINC01108-202ENST00000635227 IMMTQ16891 758 aaKnown RBP8.13□□□□□ -1.11
LINC01108-202ENST00000635227 LRRC24Q50LG9 513 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 CRIP3Q6Q6R5 217 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 B3GNT9Q6UX72 402 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 ZNF589Q86UQ0 364 aaPredicted RBP8.13□□□□□ -1.11
LINC01108-202ENST00000635227 CCDC83Q8IWF9 413 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 RHOT2Q8IXI1 618 aa8.13□□□□□ -1.11
LINC01108-202ENST00000635227 IL17RDQ8NFM7 739 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms