RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 DEPTORQ8TB45 409 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 RSPH1Q8WYR4 309 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 SMARCE1Q969G3 411 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 CYP4F11Q9HBI6 524 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 RXFP1Q9HBX9 757 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 TRMT1Q9NXH9 659 aaKnown RBP5.22□□□□□ -1.57
LINC00550-201ENST00000629293 DACH1Q9UI36 760 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 RAB23Q9ULC3 237 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 NUB1Q9Y5A7 615 aa5.22□□□□□ -1.57
LINC00550-201ENST00000629293 PKD1L2Q7Z442 2459 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 LRG1P02750 347 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 SLFN14P0C7P3 912 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 NME2P22392 152 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 AXLP30530 894 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 RARRES1P49788 294 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 CUL4BQ13620 913 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 MAPK6Q16659 721 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 EEF1DP3Q658K8 133 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 GALNT17Q6IS24 598 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 MOXD1Q6UVY6 613 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 RAB44Q7Z6P3 723 aaPredicted RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 CYP4X1Q8N118 509 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 PDCL2Q8N4E4 241 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 TAB3Q8N5C8 712 aaPredicted RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 KLHL6Q8WZ60 621 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 NSUN5Q96P11 429 aaKnown RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 SMG5Q9UPR3 1016 aaKnown RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 PCDHB14Q9Y5E9 798 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 GOLGA4Q13439 2230 aaKnown RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 ASPMQ8IZT6 3477 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 ARHGEF35A5YM69 484 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 CCDC169A6NNP5 214 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 ATXN7O15265 892 aaPredicted RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 CLSTN1O94985 981 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 SERPINC1P01008 464 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 RHOP08100 348 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 BMP2P12643 396 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 TKTP29401 623 aaKnown RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 NRLP54845 237 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 SPEM2Q0P670 501 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 HYAL2Q12891 473 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 TTC38Q5R3I4 469 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 LILRA6Q6PI73 481 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 NPAS3Q8IXF0 933 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 KIF18AQ8NI77 898 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 LNX1Q8TBB1 728 aaPredicted RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 SECISBP2LQ93073 1101 aaKnown RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 KISS1RQ969F8 398 aaPredicted RBP5.21□□□□□ -1.58
LINC00550-201ENST00000629293 SEMA4AQ9H3S1 761 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 FBXW11Q9UKB1 542 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 CYP8B1Q9UNU6 501 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 NFE2L3Q9Y4A8 694 aa5.21□□□□□ -1.58
LINC00550-201ENST00000629293 PHLPP2Q6ZVD8 1323 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 A0A1B0GUA9 196 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PDE2AO00408 941 aaPredicted RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PTGESO14684 152 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 FANCGO15287 622 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 CCP110O43303 1012 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 AVPP01185 164 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 MYL4P12829 197 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 CLCNKBP51801 687 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PFKPQ01813 784 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 FXNQ16595 210 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 SLC5A9Q2M3M2 681 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 C6orf118Q5T5N4 469 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 CDKAL1Q5VV42 579 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 FOXB2Q5VYV0 432 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 TANGO2Q6ICL3 276 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 TRIM65Q6PJ69 517 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 MTSS1LQ765P7 747 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 SPNS2Q8IVW8 549 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 REXO1L1PQ8IX06 675 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 DAGLBQ8NCG7 672 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 TCEAL4Q96EI5 215 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 CCDC51Q96ER9 411 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PAGE5Q96GU1 130 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 EPSTI1Q96J88 318 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 MBOAT7Q96N66 472 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 LTB4R2Q9NPC1 389 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PRMT7Q9NVM4 692 aaPredicted RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 DNMT3BQ9UBC3 853 aaKnown RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 GMEB2Q9UKD1 530 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 G3BP2Q9UN86 482 aaKnown RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 DSPP15924 2871 aaKnown RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 NCAM2O15394 837 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 NRDCO43847 1150 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 FAM153BP0C7A2 387 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 CPB1P15086 417 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 CEBPBP17676 345 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PBX1P40424 430 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 VIPR2P41587 438 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 MATR3P43243 847 aaKnown RBP eCLIP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 GPLD1P80108 840 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 CREMQ03060 361 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PLAURQ03405 335 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 SPIRE1Q08AE8 756 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 MTAPQ13126 283 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 NR1I3Q14994 352 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF174Q15697 407 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms