RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 TSTD2Q5T7W7 516 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 CCDC181Q5TID7 509 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 FCRLBQ6BAA4 426 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 FCRL6Q6DN72 434 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 SUMO4Q6EEV6 95 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 ZDHHC24Q6UX98 284 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 Q6ZWC4 215 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 KRT28Q7Z3Y7 464 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 ABHD11Q8NFV4 315 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 SEMA6DQ8NFY4 1073 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 HASPINQ8TF76 798 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 NTN5Q8WTR8 489 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-223ENST00000628857 RAPGEF4Q8WZA2 1011 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 ANP32EQ9BTT0 268 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 INO80BQ9C086 356 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-223ENST00000628857 CPNE5Q9HCH3 593 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 GAR1Q9NY12 217 aaKnown RBP3.69□□□□□ -1.82
CNOT1-223ENST00000628857 SPATA31A6Q5VVP1 1343 aa3.69□□□□□ -1.82
CNOT1-223ENST00000628857 LRRC3CA6NJW4 275 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 CLCA1A8K7I4 914 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 TMEM233B4DJY2 109 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 H0YIZ8 118 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 H7C1Q1 480 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 PSMD9O00233 223 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 QSOX1O00391 747 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 ZNF213O14771 459 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 CAND2O75155 1236 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 RASSF9O75901 435 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 A1BGP04217 495 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 FESP07332 822 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 ANXA2P07355 339 aaKnown RBP3.68□□□□□ -1.82
CNOT1-223ENST00000628857 PDHA1P08559 390 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 NPSP0C0P6 89 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 IL1R1P14778 569 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 CD19P15391 556 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 MCCP23508 829 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 ACVR2AP27037 513 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 CYP2C18P33260 490 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 TIRAPP58753 221 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 HTRA4P83105 476 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-223ENST00000628857 HOXA4Q00056 320 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-223ENST00000628857 SP2Q02086 613 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 DAG1Q14118 895 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 SAFBQ15424 915 aaKnown RBP eCLIP3.68□□□□□ -1.82
CNOT1-223ENST00000628857 C3orf38Q5JPI3 329 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 CCSAPQ6IQ19 270 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-223ENST00000628857 USP17L6PQ6QN14 398 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 SLC29A4Q7RTT9 530 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 DPP9Q86TI2 863 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 KRT73Q86Y46 540 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 RASAL3Q86YV0 1011 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 SFTPA1Q8IWL2 248 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 PJA1Q8NG27 643 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 SNX22Q96L94 193 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 FAM227BQ96M60 508 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 VN1R3Q9BXE9 311 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 EIF2AQ9BY44 585 aaKnown RBP3.68□□□□□ -1.82
CNOT1-223ENST00000628857 SEMA4CQ9C0C4 833 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 PNPLA8Q9NP80 782 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 ASB6Q9NWX5 421 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 ADAM21Q9UKJ8 722 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 PADI4Q9UM07 663 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 ADAMTS5Q9UNA0 930 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 USP22Q9UPT9 525 aa3.68□□□□□ -1.82
CNOT1-223ENST00000628857 FER1L4A9Z1Z3 1794 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 RHPN2P1A8MT19 583 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 KCNQ3O43525 872 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 RRP9O43818 475 aaKnown RBP3.67□□□□□ -1.82
CNOT1-223ENST00000628857 RBMXL2O75526 392 aaKnown RBP3.67□□□□□ -1.82
CNOT1-223ENST00000628857 PRKCGP05129 697 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 HNRNPCP07910 306 aaKnown RBP eCLIP3.67□□□□□ -1.82
CNOT1-223ENST00000628857 EBLN1P0CF75 366 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 UQCRC1P31930 480 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 GKP32189 559 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 PTH2RP49190 550 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 CARSP49589 748 aaKnown RBP3.67□□□□□ -1.82
CNOT1-223ENST00000628857 PDE1AP54750 535 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 TPTEP56180 551 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 C21orf58P58505 322 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 EIF2B5Q13144 721 aaKnown RBP3.67□□□□□ -1.82
CNOT1-223ENST00000628857 CLCA4Q14CN2 919 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 HSP90AB4PQ58FF6 505 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 PCID2Q5JVF3 399 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 COLEC12Q5KU26 742 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 DEPDC1Q5TB30 811 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 DENND2CQ68D51 928 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 SLC9A4Q6AI14 798 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 PLAG1Q6DJT9 500 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 CATSPERGQ6ZRH7 1159 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 UNC13DQ70J99 1090 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 CAND1Q86VP6 1230 aaKnown RBP3.67□□□□□ -1.82
CNOT1-223ENST00000628857 ARHGEF25Q86VW2 580 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 EXOC8Q8IYI6 725 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 LRRC71Q8N4P6 559 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 SIRT6Q8N6T7 355 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 VGLL2Q8N8G2 317 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 GPATCH11Q8N954 259 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 ZNF384Q8TF68 577 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 BRI3BPQ8WY22 251 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 TIFAQ96CG3 184 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms