RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 RHOBTB3O94955 611 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 P4HA1P13674 534 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 TCF3P15923 654 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 DRD1P21728 446 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 HOXC13P31276 330 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 DPYDQ12882 1025 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 NR1H3Q13133 447 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 SIM2Q14190 667 aaPredicted RBP17.46■□□□□ 0.39
LINC00628-201ENST00000628516 ZACNQ401N2 412 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 NAIF1Q69YI7 327 aaPredicted RBP17.46■□□□□ 0.39
LINC00628-201ENST00000628516 PKN3Q6P5Z2 889 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 SV2AQ7L0J3 742 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 NUP93Q8N1F7 819 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 GPR161Q8N6U8 529 aaKnown RBP17.46■□□□□ 0.39
LINC00628-201ENST00000628516 TMC2Q8TDI7 906 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 CCDC34Q96HJ3 373 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 TNIP3Q96KP6 325 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 SLITRK1Q96PX8 696 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 SDCBP2Q9H190 292 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 LINC00597Q9H2U6 94 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 FBRSL1Q9HCM7 1045 aaKnown RBP17.46■□□□□ 0.39
LINC00628-201ENST00000628516 MAPK8IP1Q9UQF2 711 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 TRAF3IP3Q9Y228 551 aa17.46■□□□□ 0.39
LINC00628-201ENST00000628516 LEFTY2O00292 366 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 HRO43593 1189 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 ATG13O75143 517 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 RNF40O75150 1001 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 CNR2P34972 360 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 ZXDBP98169 803 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 SRSF5Q13243 272 aaKnown RBP17.45■□□□□ 0.38
LINC00628-201ENST00000628516 ERMP1Q7Z2K6 904 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 FAM35AQ86V20 835 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 CD101Q93033 1021 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 KCNK16Q96T55 309 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 RNF38Q9H0F5 515 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 USP18Q9UMW8 372 aa17.45■□□□□ 0.38
LINC00628-201ENST00000628516 IKBKBO14920 756 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 RTN3O95197 1032 aaPredicted RBP17.44■□□□□ 0.38
LINC00628-201ENST00000628516 NFATC1O95644 943 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 NR2F2P24468 414 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 YWHAQP27348 245 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 HOXA6P31267 233 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 PIK3CAP42336 1068 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 VAMP7P51809 220 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 SLC7A9P82251 487 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 PNOCQ13519 176 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 LAIR1Q6GTX8 287 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 SPOPLQ6IQ16 392 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 ACOT1Q86TX2 421 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 WDR5BQ86VZ2 330 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 TAF4BQ92750 862 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 FBXO32Q969P5 355 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 SMARCD1Q96GM5 515 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 TIGD1Q96MW7 591 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 LMBRD1Q9NUN5 540 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 SMPD4Q9NXE4 827 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 SLC8A2Q9UPR5 921 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 CPQQ9Y646 472 aa17.44■□□□□ 0.38
LINC00628-201ENST00000628516 GOLGA6L22H0YM25 854 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 MAPK13O15264 365 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 AKAP3O75969 853 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 OLFM2O95897 454 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 ASS1P00966 412 aaKnown RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 OAS1P00973 400 aaKnown RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 HLA-DRAP01903 254 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 MBL2P11226 248 aaPredicted RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 PXNP49023 591 aaPredicted RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 ORC1Q13415 861 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 PUM1Q14671 1186 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 NFIL3Q16649 462 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 RSPO4Q2I0M5 234 aaPredicted RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 FBXO43Q4G163 708 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 C1orf220Q5T0J3 134 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 PAQR9Q6ZVX9 377 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 INTS8Q75QN2 995 aaKnown RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 CEP68Q76N32 757 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 GUF1Q8N442 669 aaKnown RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 PDZD8Q8NEN9 1154 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 ERCC4Q92889 916 aaPredicted RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 DMAP1Q9NPF5 467 aaPredicted RBP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00628-201ENST00000628516 KRT82Q9NSB4 513 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 CEP250Q9BV73 2442 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 ATG2BQ96BY7 2078 aa17.43■□□□□ 0.38
LINC00628-201ENST00000628516 AP1G2O75843 785 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 RETP07949 1114 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 TRIM49P0CI25 452 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 TRIM49CP0CI26 452 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 KRT13P13646 458 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 CCDC130P13994 396 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 RPL13P26373 211 aaKnown RBP17.42■□□□□ 0.38
LINC00628-201ENST00000628516 NDST1P52848 882 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 SLC5A3P53794 718 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 SPEM2Q0P670 501 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 ADAM9Q13443 819 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 DGLUCYQ7Z3D6 616 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.42■□□□□ 0.38
LINC00628-201ENST00000628516 FILIP1Q7Z7B0 1213 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 FAM186BQ8IYM0 893 aa17.42■□□□□ 0.38
LINC00628-201ENST00000628516 FUKQ8N0W3 1084 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms