RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 SMNDC1O75940 238 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC00552-201ENST00000625151 MARK3P27448 753 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 ETV4P43268 484 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 NEK3P51956 506 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 EFNA5P52803 228 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 GPR162Q16538 588 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 KBTBD12Q3ZCT8 623 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 CDR2LQ86X02 465 aaPredicted RBP15.89■□□□□ 0.13
LINC00552-201ENST00000625151 RNF149Q8NC42 400 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 SPATA18Q8TC71 538 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 FAM111AQ96PZ2 611 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 CADM1Q9BY67 442 aaKnown RBP15.89■□□□□ 0.13
LINC00552-201ENST00000625151 TRIM55Q9BYV6 548 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 KCNK13Q9HB14 408 aa15.89■□□□□ 0.13
LINC00552-201ENST00000625151 KBTBD13C9JR72 458 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 E7ENQ6 273 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 MCF2LO15068 1137 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 DHRS4L1P0CG22 281 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 FAAP100Q0VG06 881 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 LAMTOR4Q0VGL1 99 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 BLMHQ13867 455 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 CDCA2Q69YH5 1023 aaPredicted RBP15.88■□□□□ 0.13
LINC00552-201ENST00000625151 TRIM68Q6AZZ1 485 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 SH2D5Q6ZV89 423 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 LRRC71Q8N4P6 559 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 CMASQ8NFW8 434 aaPredicted RBP15.88■□□□□ 0.13
LINC00552-201ENST00000625151 ZNF668Q96K58 619 aaPredicted RBP15.88■□□□□ 0.13
LINC00552-201ENST00000625151 SDCBP2Q9H190 292 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 SYNCQ9H7C4 482 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 FBXO6Q9NRD1 293 aaPredicted RBP15.88■□□□□ 0.13
LINC00552-201ENST00000625151 HMGXB4Q9UGU5 601 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 ZNF112Q9UJU3 913 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 HAUS5O94927 633 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 SERPINB3P29508 390 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 PTDSS1P48651 473 aaKnown RBP15.88■□□□□ 0.13
LINC00552-201ENST00000625151 ZC3H18Q86VM9 953 aaKnown RBP15.88■□□□□ 0.13
LINC00552-201ENST00000625151 TTC17Q96AE7 1141 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 PTCD3Q96EY7 689 aaKnown RBP15.88■□□□□ 0.13
LINC00552-201ENST00000625151 APOPT1Q96IL0 206 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 ANKRD27Q96NW4 1050 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 TWNKQ96RR1 684 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 PEBP4Q96S96 227 aa15.88■□□□□ 0.13
LINC00552-201ENST00000625151 C2orf71A6NGG8 1288 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 AVILO75366 819 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 TRUB2O95900 331 aaKnown RBP15.87■□□□□ 0.13
LINC00552-201ENST00000625151 KRT19P08727 400 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 BGNP21810 368 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 TCF7P36402 384 aaPredicted RBP15.87■□□□□ 0.13
LINC00552-201ENST00000625151 ARFIP2P53365 341 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 RAB6CQ53S08 254 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 DCAF15Q66K64 600 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 C4orf50Q6ZRC1 276 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 DNERQ8NFT8 737 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 MICAL1Q8TDZ2 1067 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 SLC44A1Q8WWI5 657 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 SPDL1Q96EA4 605 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 TMEM120AQ9BXJ8 343 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 RAB6CQ9H0N0 254 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 USP18Q9UMW8 372 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 TEX264Q9Y6I9 313 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 IQANK1A0A1B0GTG1 560 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 MED7O43513 233 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 NEBLO76041 1014 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 TNNC2P02585 160 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 PYGBP11216 843 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 TSHRP16473 764 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 YWHAGP61981 247 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC00552-201ENST00000625151 ZNF200P98182 395 aaPredicted RBP15.87■□□□□ 0.13
LINC00552-201ENST00000625151 SLC18A2Q05940 514 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 PRKG1Q13976 671 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 KCNJ11Q14654 390 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 PRKD1Q15139 912 aaPredicted RBP15.87■□□□□ 0.13
LINC00552-201ENST00000625151 SURF1Q15526 300 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 KHDC1Q4VXA5 237 aaKnown RBP15.87■□□□□ 0.13
LINC00552-201ENST00000625151 SH3PXD2AQ5TCZ1 1133 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 DSTYKQ6XUX3 929 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 CHSY1Q86X52 802 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 TMEM192Q8IY95 271 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 SKA1Q96BD8 255 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 SSC5DA1L4H1 1573 aa15.87■□□□□ 0.13
LINC00552-201ENST00000625151 SMAPO00193 183 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 HNRNPCL1O60812 293 aaKnown RBP15.86■□□□□ 0.13
LINC00552-201ENST00000625151 LUC7L3O95232 432 aaKnown RBP15.86■□□□□ 0.13
LINC00552-201ENST00000625151 DLDP09622 509 aaKnown RBP15.86■□□□□ 0.13
LINC00552-201ENST00000625151 ROR1Q01973 937 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 DARS2Q6PI48 645 aaKnown RBP15.86■□□□□ 0.13
LINC00552-201ENST00000625151 PRPF39Q86UA1 669 aaKnown RBP15.86■□□□□ 0.13
LINC00552-201ENST00000625151 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.86■□□□□ 0.13
LINC00552-201ENST00000625151 SLC4A11Q8NBS3 891 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 ANKRD36BP1Q96IX9 119 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 BTBD10Q9BSF8 475 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 SIX4Q9UIU6 781 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 IKBKGQ9Y6K9 419 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 C19orf81C9J6K1 198 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 B4GALT5O43286 388 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 CCDC22O60826 627 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 FAM155BO75949 473 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 GJB1P08034 283 aa15.86■□□□□ 0.13
LINC00552-201ENST00000625151 INHBAP08476 426 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms