RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 YARSP54577 528 aaKnown RBP18.49■□□□□ 0.55
PCF11-207ENST00000624931 KYNUQ16719 465 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 APLFQ8IW19 511 aaPredicted RBP18.49■□□□□ 0.55
PCF11-207ENST00000624931 FITM2Q8N6M3 262 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 DDX1Q92499 740 aaKnown RBP18.49■□□□□ 0.55
PCF11-207ENST00000624931 ANAPC7Q9UJX3 599 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 NEU2Q9Y3R4 380 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 MROH7Q68CQ1 1323 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 RALGAPA2Q2PPJ7 1873 aa18.48■□□□□ 0.55
PCF11-207ENST00000624931 DNAH12Q6ZR08 3092 aa18.48■□□□□ 0.55
PCF11-207ENST00000624931 PRPF4O43172 522 aaKnown RBP eCLIP18.48■□□□□ 0.552e-8■■□□□ 14.2
PCF11-207ENST00000624931 KRT16P08779 473 aa18.48■□□□□ 0.55
PCF11-207ENST00000624931 HSPA8P11142 646 aaKnown RBP18.48■□□□□ 0.55
PCF11-207ENST00000624931 TAC1P20366 129 aa18.48■□□□□ 0.55
PCF11-207ENST00000624931 GRM5P41594 1212 aa18.48■□□□□ 0.55
PCF11-207ENST00000624931 GCNT1Q02742 428 aa18.48■□□□□ 0.55
PCF11-207ENST00000624931 CMPK2Q5EBM0 449 aa18.48■□□□□ 0.55
PCF11-207ENST00000624931 UBAP2Q5T6F2 1119 aaKnown RBP18.48■□□□□ 0.55
PCF11-207ENST00000624931 AGO3Q9H9G7 860 aaKnown RBP18.48■□□□□ 0.55
PCF11-207ENST00000624931 CITO14578 2027 aa18.48■□□□□ 0.55
PCF11-207ENST00000624931 CLGNO14967 610 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 IL18RAPO95256 599 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 CST3P01034 146 aaPredicted RBP18.47■□□□□ 0.55
PCF11-207ENST00000624931 TMEM191BP0C7N4 346 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 PTK7Q13308 1070 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 NCOA4Q13772 614 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 SPARCL1Q14515 664 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 TRIP11Q15643 1979 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 LIN9Q5TKA1 542 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 TRIM72Q6ZMU5 477 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 ZCCHC9Q8N567 271 aaKnown RBP18.47■□□□□ 0.55
PCF11-207ENST00000624931 SLC43A3Q8NBI5 491 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 ACAP3Q96P50 834 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 LRMDAQ9H2I8 198 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 CHST7Q9NS84 486 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 EURLQ9NYK6 297 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 CTNNAL1Q9UBT7 734 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 ST3GAL5Q9UNP4 418 aa18.47■□□□□ 0.55
PCF11-207ENST00000624931 FAM170AA1A519 330 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 ATMINO43313 823 aaPredicted RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 AKAP5P24588 427 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 NFX1Q12986 1120 aaKnown RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 KCTD19Q17RG1 926 aaPredicted RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 ZNF618Q5T7W0 954 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 ANKS1BQ7Z6G8 1248 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 RHOT1Q8IXI2 618 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 MCOLN2Q8IZK6 566 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 THOC1Q96FV9 657 aaKnown RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 VCPIP1Q96JH7 1222 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 BTBD6Q96KE9 485 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 L3MBTL1Q9Y468 752 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 DIAPH2O60879 1101 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 RECQL4O94761 1208 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 PROSCO94903 275 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 CALCAP01258 141 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 UNGP13051 313 aaPredicted RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 IBSPP21815 317 aaPredicted RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 AXLP30530 894 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 CD52P31358 61 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 MYL6P60660 151 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 IRX1P78414 480 aaPredicted RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 SNX1Q13596 522 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 PCBP1Q15365 356 aaKnown RBP eCLIP18.46■□□□□ 0.55
PCF11-207ENST00000624931 SURF1Q15526 300 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 DUOXA2Q1HG44 320 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 BZW1Q7L1Q6 419 aaKnown RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 KATNAL2Q8IYT4 538 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 GDAP1Q8TB36 358 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 ZNF398Q8TD17 642 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 MAML1Q92585 1016 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 SNX27Q96L92 541 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 MRPL47Q9HD33 250 aaKnown RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 SSU72Q9NP77 194 aaKnown RBP18.46■□□□□ 0.55
PCF11-207ENST00000624931 C1orf112Q9NSG2 853 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 KLK14Q9P0G3 267 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 ADAM22Q9P0K1 906 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 NUB1Q9Y5A7 615 aa18.46■□□□□ 0.55
PCF11-207ENST00000624931 RASA4BC9J798 803 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 ARVCFO00192 962 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 RASA4O43374 803 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 LMNAP02545 664 aaKnown RBP18.45■□□□□ 0.54
PCF11-207ENST00000624931 TNNC2P02585 160 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 KLF1Q13351 362 aaPredicted RBP18.45■□□□□ 0.54
PCF11-207ENST00000624931 MPP2Q14168 576 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 GLRA4Q5JXX5 417 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 FBXO47Q5MNV8 452 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 WASHC2DQ5SRD0 308 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 IZUMO3Q5VZ72 239 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 TWF2Q6IBS0 349 aaKnown RBP18.45■□□□□ 0.54
PCF11-207ENST00000624931 DRICH1Q6PGQ1 229 aaPredicted RBP18.45■□□□□ 0.54
PCF11-207ENST00000624931 VSIG1Q86XK7 387 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 ECHDC2Q86YB7 292 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 SRRM1Q8IYB3 904 aaKnown RBP18.45■□□□□ 0.54
PCF11-207ENST00000624931 C1orf127Q8N9H9 656 aa18.45■□□□□ 0.54
PCF11-207ENST00000624931 EXD1Q8NHP7 514 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms