RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 STBD1O95210 358 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 GAS8O95995 478 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 ZBED1O96006 694 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 BDNFP23560 247 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 GJC1P36383 396 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 NSFP46459 744 aaKnown RBP12.99□□□□□ -0.33
LITAF-221ENST00000622633 MAP3K10Q02779 954 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 MPP2Q14168 576 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 ARL13BQ3SXY8 428 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 RNF43Q68DV7 783 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 ENOSF1Q7L5Y1 443 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 VASH1Q7L8A9 365 aaPredicted RBP12.99□□□□□ -0.33
LITAF-221ENST00000622633 SIX5Q8N196 739 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 TRPC4APQ8TEL6 797 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 LPAR1Q92633 364 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 CEP44Q9C0F1 390 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 AVENQ9NQS1 362 aaPredicted RBP12.99□□□□□ -0.33
LITAF-221ENST00000622633 USTQ9Y2C2 406 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 RIPK3Q9Y572 518 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 PCDHB2Q9Y5E7 798 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 TTC34A8MYJ7 566 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 TNFRSF10AO00220 468 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 WNT10BO00744 389 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 CAPN9O14815 690 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 MAP3K7O43318 606 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 ADCY3O60266 1144 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 KRT36O76013 467 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 UBL4AP11441 157 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 CPA3P15088 417 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 TARSP26639 723 aaKnown RBP12.99□□□□□ -0.33
LITAF-221ENST00000622633 SLC1A1P43005 524 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 TAS2R40P59535 323 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 NAA20P61599 178 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 WDR44Q5JSH3 913 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 ECHDC2Q86YB7 292 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 MYO1HQ8N1T3 1032 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 GFM2Q969S9 779 aaKnown RBP12.99□□□□□ -0.33
LITAF-221ENST00000622633 ITPKCQ96DU7 683 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 C11orf70Q9BRQ4 267 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 KIAA1683Q9H0B3 1180 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 XPNPEP1Q9NQW7 623 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 NINJ2Q9NZG7 142 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 SELENONQ9NZV5 590 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 NDUFA13Q9P0J0 144 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 TBK1Q9UHD2 729 aa12.99□□□□□ -0.33
LITAF-221ENST00000622633 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
LITAF-221ENST00000622633 TBKBP1A7MCY6 615 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 ZBED4O75132 1171 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 ATP5HO75947 161 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 HLA-DRAP01903 254 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 TNNI1P19237 187 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 DSG3P32926 999 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 ACOT2P49753 483 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 CTAG1AP78358 180 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 BRDTQ58F21 947 aaPredicted RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 RFWD3Q6PCD5 774 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 C4orf50Q6ZRC1 276 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 C15orf39Q6ZRI6 1047 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 SYDE1Q6ZW31 735 aaPredicted RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 ANKS1BQ7Z6G8 1248 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 MYLK2Q9H1R3 596 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 MAP3K20Q9NYL2 800 aaKnown RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 SEPT9Q9UHD8 586 aaPredicted RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 DOLKQ9UPQ8 538 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 SH3PXD2BA1X283 911 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 TEX28O15482 410 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 PROSCO94903 275 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 GH1P01241 217 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 NR3C2P08235 984 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 CETPP11597 493 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 GARTP22102 1010 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 MZF1P28698 734 aaPredicted RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 MTMR2Q13614 643 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 CYTH1Q15438 398 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 TGFBIQ15582 683 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 KCTD21Q4G0X4 260 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 SYCP2LQ5T4T6 812 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 TDRD10Q5VZ19 366 aaKnown RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 MON1BQ7L1V2 547 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 ARHGAP24Q8N264 748 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 GRK7Q8WTQ7 553 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 ATG4CQ96DT6 458 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 C9orf72Q96LT7 481 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 POLR3FQ9H1D9 316 aaPredicted RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
LITAF-221ENST00000622633 C17orf75Q9HAS0 396 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
LITAF-221ENST00000622633 UMODL1Q5DID0 1318 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 LOC105371267A0A1B0GV96 52 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 EXTL3O43909 919 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 ZC3H11AO75152 810 aaKnown RBP eCLIP12.97□□□□□ -0.33
LITAF-221ENST00000622633 MTRF1O75570 445 aaKnown RBP12.97□□□□□ -0.33
LITAF-221ENST00000622633 BRAFP15056 766 aa12.97□□□□□ -0.33
LITAF-221ENST00000622633 CD58P19256 250 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms