RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 GSTCDQ8NEC7 633 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 BSNDQ8WZ55 320 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 ZNF516Q92618 1163 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 NKD2Q969F2 451 aaPredicted RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 MTBPQ96DY7 904 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 ARHGAP28Q9P2N2 729 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 PPARGC1AQ9UBK2 798 aaKnown RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 F8W8V4 182 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 LDHAP00338 332 aaKnown RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 MYCLP12524 364 aaPredicted RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 KRT10P13645 584 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 HIRAP54198 1017 aaPredicted RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 GPX6P59796 221 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 MSLNQ13421 630 aaPredicted RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 NCOA4Q13772 614 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 RNASEH2BQ5TBB1 312 aaKnown RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 C6orf163Q5TEZ5 329 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 DUS1LQ6P1R4 473 aaKnown RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 RNF111Q6ZNA4 994 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 RBM44Q6ZP01 1051 aaKnown RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 PDSS2Q86YH6 399 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 TMPRSS6Q8IU80 811 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 SMC1BQ8NDV3 1235 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 KCNN1Q92952 543 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 FAM111AQ96PZ2 611 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 TAAR1Q96RJ0 339 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 SPDYE16A6NNV3 312 aaPredicted RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 PI4K2BG5E9Z4 385 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 TM9SF1O15321 606 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 MAGEC1O60732 1142 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 SORBS2O94875 1100 aaKnown RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 TMCC1O94876 653 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 ATF7P17544 494 aaPredicted RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 GALK1P51570 392 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 KLHL38Q2WGJ6 581 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 EFHC2Q5JST6 749 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 SLFN12LQ6IEE8 588 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 HIPK4Q8NE63 616 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 HAUS1Q96CS2 278 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 GPRASP2Q96D09 838 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 CLMNQ96JQ2 1002 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 PDCD2LQ9BRP1 358 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 CCDC28BQ9BUN5 200 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 CTDP1Q9Y5B0 961 aaPredicted RBP13.6□□□□□ -0.23
CHD1L-210ENST00000622533 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
CHD1L-210ENST00000622533 CENPFP49454 3210 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 CLRN2A0PK11 232 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 LSM8O95777 96 aaKnown RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 HNRNPCP07910 306 aaKnown RBP eCLIP13.59□□□□□ -0.233e-6■■□□□ 11.7
CHD1L-210ENST00000622533 KITP10721 976 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TSHRP16473 764 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TFDP3Q5H9I0 405 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 ARHGEF16Q5VV41 709 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TDRD10Q5VZ19 366 aaKnown RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TMEM270Q6UE05 265 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 SPOCD1Q6ZMY3 1216 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 ATP11CQ8NB49 1132 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 USP6NLQ92738 828 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 RMDN3Q96TC7 470 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 SMYD3Q9H7B4 428 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 ZNF395Q9H8N7 513 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 PXMP2Q9NR77 195 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 PLA2G4CQ9UP65 541 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 CNTNAP1P78357 1384 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TMEM191CA6NGB0 347 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 VILLO15195 856 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TM7SF2O76062 418 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 PSAPP07602 524 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TMEM191BP0C7N4 346 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 VCLP18206 1134 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 HSPA1LP34931 641 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 RPS6P62753 249 aaKnown RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 PIGHQ14442 188 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 OASLQ15646 514 aaKnown RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TRMT5Q32P41 509 aaKnown RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 ATP13A4Q4VNC1 1196 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TRMT1LQ7Z2T5 733 aaKnown RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 FAM83AQ86UY5 434 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 PASD1Q8IV76 773 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 PDLIM7Q9NR12 457 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 MARCOQ9UEW3 520 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 AGO2Q9UKV8 859 aaKnown RBP13.59□□□□□ -0.23
CHD1L-210ENST00000622533 EFR3BQ9Y2G0 817 aa13.59□□□□□ -0.23
CHD1L-210ENST00000622533 TESPA1A2RU30 521 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-210ENST00000622533 MMP8P22894 467 aa13.58□□□□□ -0.24
CHD1L-210ENST00000622533 PEX2P28328 305 aa13.58□□□□□ -0.24
CHD1L-210ENST00000622533 CCND2P30279 289 aa13.58□□□□□ -0.24
CHD1L-210ENST00000622533 HIF1AQ16665 826 aa13.58□□□□□ -0.24
CHD1L-210ENST00000622533 MMEL1Q495T6 779 aa13.58□□□□□ -0.24
CHD1L-210ENST00000622533 RSBN1LQ6PCB5 846 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-210ENST00000622533 CPXCR1Q8N123 301 aa13.58□□□□□ -0.24
CHD1L-210ENST00000622533 BANPQ8N9N5 519 aa13.58□□□□□ -0.24
CHD1L-210ENST00000622533 TTC13Q8NBP0 860 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms