RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PRMT7Q9NVM4 692 aaPredicted RBP18.31■□□□□ 0.52
FAM3A-222ENST00000621967 USP15Q9Y4E8 981 aaPredicted RBP18.31■□□□□ 0.52
FAM3A-222ENST00000621967 hCG_1818297A0A087WSY0 165 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 FOXO6A8MYZ6 492 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 CHUKO15111 745 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 SELPP16109 830 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 BRD2P25440 801 aaKnown RBP18.31■□□□□ 0.52
FAM3A-222ENST00000621967 MYL6P60660 151 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 PIGHQ14442 188 aaPredicted RBP18.31■□□□□ 0.52
FAM3A-222ENST00000621967 OASLQ15646 514 aaKnown RBP18.31■□□□□ 0.52
FAM3A-222ENST00000621967 LRRC8DQ7L1W4 858 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 PARP9Q8IXQ6 854 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 TMEM40Q8WWA1 233 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 MAML1Q92585 1016 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 MCEEQ96PE7 176 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
FAM3A-222ENST00000621967 KCNK9Q9NPC2 374 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
FAM3A-222ENST00000621967 CISHQ9NSE2 258 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 F8VP50 259 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 OGTO15294 1046 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 SURF1Q15526 300 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 SGSM1Q2NKQ1 1148 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 FAM26DQ5JW98 314 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 TDRPQ86YL5 185 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 WDTC1Q8N5D0 677 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
FAM3A-222ENST00000621967 CFAP57Q96MR6 1250 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 TTC25Q96NG3 672 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 PPP1R12CQ9BZL4 782 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 FZD8Q9H461 694 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 ABCF3Q9NUQ8 709 aa18.3■□□□□ 0.52
FAM3A-222ENST00000621967 DDX56Q9NY93 547 aaKnown RBP18.3■□□□□ 0.52
FAM3A-222ENST00000621967 CPSF3Q9UKF6 684 aaKnown RBP18.3■□□□□ 0.52
FAM3A-222ENST00000621967 MGRN1O60291 552 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 ATF7P17544 494 aaPredicted RBP18.29■□□□□ 0.52
FAM3A-222ENST00000621967 GCAP28676 217 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 VCPP55072 806 aaKnown RBP18.29■□□□□ 0.52
FAM3A-222ENST00000621967 PCBP1Q15365 356 aaKnown RBP eCLIP18.29■□□□□ 0.526e-7■■■■□ 21.8
FAM3A-222ENST00000621967 DUOXA2Q1HG44 320 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 TFDP3Q5H9I0 405 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 KAZNQ674X7 775 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 ARHGEF18Q6ZSZ5 1173 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 ANKRD42Q8N9B4 389 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 MAGEB18Q96M61 343 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 TBX21Q9UL17 535 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 ZNF148Q9UQR1 794 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 ACKR2O00590 384 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 SUN1O94901 812 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 ITGAVP06756 1048 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 IQCF3P0C7M6 154 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 CDKN2BP42772 138 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 MORF4L2Q15014 288 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 NUGGCQ68CJ6 796 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 TXNRD3NBQ6F5E7 133 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 POLNQ7Z5Q5 900 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 ZBTB33Q86T24 672 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 SRRM1Q8IYB3 904 aaKnown RBP18.29■□□□□ 0.52
FAM3A-222ENST00000621967 SAYSD1Q9NPB0 183 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 TBK1Q9UHD2 729 aa18.29■□□□□ 0.52
FAM3A-222ENST00000621967 TPX2Q9ULW0 747 aaKnown RBP18.29■□□□□ 0.52
FAM3A-222ENST00000621967 NDC80O14777 642 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 PROZP22891 400 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 ASPAP45381 313 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 ARSEP51690 589 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 NR1H3Q13133 447 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 SNCBQ16143 134 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 FAM187BQ17R55 369 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 GALNTL6Q49A17 601 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 FBXO47Q5MNV8 452 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 RNASEH2BQ5TBB1 312 aaKnown RBP18.28■□□□□ 0.52
FAM3A-222ENST00000621967 DCUN1D2Q6PH85 259 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 PPP1R21Q6ZMI0 780 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 MAGEC3Q8TD91 643 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 TFAP2BQ92481 460 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 PLCD4Q9BRC7 762 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 HTATIP2Q9BUP3 242 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 XYLT2Q9H1B5 865 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 UBN1Q9NPG3 1134 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 PRKAG3Q9UGI9 489 aa18.28■□□□□ 0.52
FAM3A-222ENST00000621967 B4GALT5O43286 388 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 ZSCAN5DPP0CG00 497 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 PECAM1P16284 738 aaPredicted RBP18.27■□□□□ 0.52
FAM3A-222ENST00000621967 STX2P32856 288 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 WDR72Q3MJ13 1102 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 TRAF7Q6Q0C0 670 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 SPATA21Q7Z572 469 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 TRABD2AQ86V40 505 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 FAM228AQ86W67 206 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 SLC35B2Q8TB61 432 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 TGS1Q96RS0 853 aaKnown RBP18.27■□□□□ 0.52
FAM3A-222ENST00000621967 TCHPQ9BT92 498 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 PCDH9Q9HC56 1237 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 MLXIPLQ9NP71 852 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 NKIRAS1Q9NYS0 192 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 SHOC2Q9UQ13 582 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 EFR3BQ9Y2G0 817 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 ARL2BPQ9Y2Y0 163 aa18.27■□□□□ 0.52
FAM3A-222ENST00000621967 CFAP73A6NFT4 308 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms