RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 GLI1P08151 1106 aa11.99□□□□□ -0.49
CLTC-215ENST00000621829 CCSAPQ6IQ19 270 aaPredicted RBP11.99□□□□□ -0.49
CLTC-215ENST00000621829 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
CLTC-215ENST00000621829 TRPV5Q9NQA5 729 aa11.99□□□□□ -0.49
CLTC-215ENST00000621829 SPEF1Q9Y4P9 236 aa11.99□□□□□ -0.49
CLTC-215ENST00000621829 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 NDUFAF6Q330K2 333 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 USP17L6PQ6QN14 398 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 FAM228AQ86W67 206 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 TTC30AQ86WT1 665 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 FBXO28Q9NVF7 368 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 PAK5Q9P286 719 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 PCDHA6Q9UN73 950 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 TPRKBQ9Y3C4 175 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 PCDHA8Q9Y5H6 950 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 PIGHQ14442 188 aaPredicted RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 ADCK2Q7Z695 626 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 STK32CQ86UX6 486 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 LY9Q9HBG7 655 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 IQCMA0A1B0GVH7 501 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 NMT2O60551 498 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 PRELPP51888 382 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 FAM98BQ52LJ0 330 aaKnown RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 FBXO36Q8NEA4 188 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 RBM46Q8TBY0 533 aaKnown RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 CAVIN3Q969G5 261 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 CAPN10Q9HC96 672 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 HIST1H2AGP0C0S8 130 aaPredicted RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 HIST1H2ADP20671 130 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 ALDH1A3P47895 512 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 HIST1H2AHQ96KK5 128 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 MNTQ99583 582 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 HIST1H2AJQ99878 128 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 H2AFJQ9BTM1 129 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 BMP3P12645 472 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 DDX39BQ13838 428 aaKnown RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 ZFP1Q6P2D0 407 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 TBC1D10CQ8IV04 446 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 C10orf53Q8N6V4 93 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 CCSER2Q9H7U1 834 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 PTPRHQ9HD43 1115 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 ING3Q9NXR8 418 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 ATP10DQ9P241 1426 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 ERCC2P18074 760 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 IREB2P48200 963 aaKnown RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 USP4Q13107 963 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 FAM83EQ2M2I3 478 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 DHRSXQ8N5I4 330 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 RNF145Q96MT1 663 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 KIAA1586Q9HCI6 787 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 RBAKQ9NYW8 714 aaPredicted RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 ERAP1Q9NZ08 941 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 PLB1Q6P1J6 1458 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 WDR19Q8NEZ3 1342 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 GLRA3O75311 464 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 KPNA1P52294 538 aaPredicted RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 ZNF669Q96BR6 464 aaPredicted RBP11.98□□□□□ -0.49
CLTC-215ENST00000621829 DCUN1D1Q96GG9 259 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 VPS33BQ9H267 617 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 TMEM138Q9NPI0 162 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 ZHX2Q9Y6X8 837 aa11.98□□□□□ -0.49
CLTC-215ENST00000621829 FCHO1O14526 889 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 PROCP04070 461 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 FAM153BP0C7A2 387 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 CYP4F2P78329 520 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 CYP4F3Q08477 520 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 ZNF846Q147U1 533 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 FAM153CQ494X1 144 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 ATP6AP1LQ52LC2 224 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 DHFR2Q86XF0 187 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 PLXNC1O60486 1568 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 TM9SF1O15321 606 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 DBTP11182 482 aaKnown RBP11.97□□□□□ -0.49
CLTC-215ENST00000621829 GRSF1Q12849 480 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLTC-215ENST00000621829 CDC16Q13042 620 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 FAM129BQ96TA1 746 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 WHRNQ9P202 907 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 UBA2Q9UBT2 640 aaPredicted RBP11.97□□□□□ -0.49
CLTC-215ENST00000621829 ZNF806P0C7X5 589 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 RABL6Q3YEC7 729 aaPredicted RBP11.97□□□□□ -0.49
CLTC-215ENST00000621829 DENND1BQ6P3S1 775 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 ENOSF1Q7L5Y1 443 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 KRT78Q8N1N4 520 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 IPMKQ8NFU5 416 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 MROH7-TTC4A0A0A0MT08 1334 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 MT-CO1P00395 513 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 GRK3P35626 688 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 RGS7P49802 495 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 CENPCQ03188 943 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 EPS8Q12929 822 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 DGKDQ16760 1214 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 PROSER3Q2NL68 480 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 NACC2Q96BF6 587 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 MLXQ9UH92 298 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms