RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 TTC9BQ8N6N2 239 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 EMC1Q8N766 993 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 CLEC4CQ8WTT0 213 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 PGLYRP2Q96PD5 576 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 PNPLA8Q9NP80 782 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 IP6K2Q9UHH9 426 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 SNX12Q9UMY4 172 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 PCDHB5Q9Y5E4 795 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 ALG6Q9Y672 507 aa11.21□□□□□ -0.61
CPNE3-212ENST00000621783 GBF1Q92538 1859 aa11.21□□□□□ -0.62
CPNE3-212ENST00000621783 F8VP50 259 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 SPOPO43791 374 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 GRAP2O75791 330 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 RPL17P18621 184 aaKnown RBP11.2□□□□□ -0.62
CPNE3-212ENST00000621783 GPD1P21695 349 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 DNAJB2P25686 324 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 CTNNB1P35222 781 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 RFC1P35251 1148 aaPredicted RBP11.2□□□□□ -0.62
CPNE3-212ENST00000621783 GRIK1P39086 918 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 MAGEA11P43364 429 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 TKTL1P51854 596 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 ROR1Q01973 937 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 RPS6KA1Q15418 735 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 SHHQ15465 462 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 TAF5Q15542 800 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 TRNP1Q6NT89 227 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 SLC26A9Q7LBE3 791 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 SCN4BQ8IWT1 228 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 SCUBE3Q8IX30 993 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 VPS52Q8N1B4 723 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 KLHL23Q8NBE8 558 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 FNIP1Q8TF40 1166 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 CD101Q93033 1021 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 HES6Q96HZ4 224 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 OSBPL9Q96SU4 736 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 PSMB7Q99436 277 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 ULBP1Q9BZM6 244 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 UBXN6Q9BZV1 441 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 ZBP1Q9H171 429 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 L2HGDHQ9H9P8 463 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 TMEM59LQ9UK28 342 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 MRFAP1Q9Y605 127 aa11.2□□□□□ -0.62
CPNE3-212ENST00000621783 COL4A4P53420 1690 aaPredicted RBP11.2□□□□□ -0.62
CPNE3-212ENST00000621783 MYH10P35580 1976 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 MYO16Q9Y6X6 1858 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 WDR27A2RRH5 827 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 LINC01553A4QN01 128 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 C2CD4BA6NLJ0 364 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 GRXCR1A8MXD5 290 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 DPYSL4O14531 572 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 TRIM66O15016 1216 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 DDX3YO15523 660 aaKnown RBP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 SRGAP2O75044 1071 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 DAB1O75553 588 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 FBXO21O94952 628 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 ARHGEF15O94989 841 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 TCP1P17987 556 aaKnown RBP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 PSMA2P25787 234 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 CTNNA2P26232 953 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 FLT3P36888 993 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 SLC1A1P43005 524 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 MARCKSL1P49006 195 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 GPR15P49685 360 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 NDUFV1P49821 464 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 DAOAP59103 153 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 RNASE9P60153 205 aaKnown RBP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 MRPS5P82675 430 aaKnown RBP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 KRT17Q04695 432 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 SMARCB1Q12824 385 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 DAB2IPQ5VWQ8 1189 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 FAM109BQ6ICB4 259 aaPredicted RBP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 VSTM1Q6UX27 236 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 NIPA2Q8N8Q9 360 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 ATAD1Q8NBU5 361 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 SPPL2BQ8TCT7 592 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 C2orf15Q8WU43 125 aaKnown RBP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 AUTS2Q8WXX7 1259 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 NDRG1Q92597 394 aaKnown RBP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.62
CPNE3-212ENST00000621783 C8orf48Q96LL4 319 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 CRISPLD1Q9H336 500 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 CNGB3Q9NQW8 809 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 STK39Q9UEW8 545 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 CDC23Q9UJX2 597 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 USTQ9Y2C2 406 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 RWDD3Q9Y3V2 267 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 SAR1BQ9Y6B6 198 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 PLXNA3P51805 1871 aa11.19□□□□□ -0.62
CPNE3-212ENST00000621783 MIF4GDA9UHW6 222 aaKnown RBP11.18□□□□□ -0.62
CPNE3-212ENST00000621783 ZNF185O15231 689 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 SART1O43290 800 aaKnown RBP11.18□□□□□ -0.62
CPNE3-212ENST00000621783 HSF2BPO75031 334 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 SOAT2O75908 522 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 USP17L7P0C7H9 530 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 CTSAP10619 480 aa11.18□□□□□ -0.62
CPNE3-212ENST00000621783 HAPLN1P10915 354 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms