RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MTTPP55157 894 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 DYNLL1P63167 89 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 DLG4P78352 724 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 FSTL1Q12841 308 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 NBPF12Q5TAG4 269 aaPredicted RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 THEMIS2Q5TEJ8 643 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 AGAP9Q5VTM2 703 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 CRELD2Q6UXH1 353 aaPredicted RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 EID3Q8N140 333 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PHACTR1Q9C0D0 580 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 TLR7Q9NYK1 1049 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 R3HDM2Q9Y2K5 976 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PNMA6FA0A0J9YX94 578 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 F8W810 466 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TEX46H3BTG2 121 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SH2B2O14492 632 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 P4HA2O15460 535 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CYP27B1O15528 508 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ATP6V1G2O95670 118 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 FTLP02792 175 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ANXA6P08133 673 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 MYL12AP19105 171 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 FGFR4P22455 802 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CSE1LP55060 971 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 KNOP1Q1ED39 458 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 FAM98BQ52LJ0 330 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 RC3H1Q5TC82 1133 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ZBTB49Q6ZSB9 765 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TAS2R42Q7RTR8 314 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF677Q86XU0 584 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ERO1BQ86YB8 467 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SP8Q8IXZ3 490 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SMYD4Q8IYR2 804 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CHST13Q8NET6 341 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 RDM1Q8NG50 284 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PUS3Q9BZE2 481 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 MOV10Q9HCE1 1003 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CYP2D7A0A087X1C5 515 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 C1orf232A0A0U1RR37 186 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CETPP11597 493 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PECAM1P16284 738 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SFNP31947 248 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CDO1Q16878 200 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SLC25A24Q6NUK1 477 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TAF8Q7Z7C8 310 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 NMD3Q96D46 503 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TMEM79Q9BSE2 394 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CHID1Q9BWS9 393 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 GGA2Q9UJY4 613 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TTC7AQ9ULT0 858 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 C15orf41Q9Y2V0 281 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SPACA6W5XKT8 324 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 VPS4BO75351 444 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 LRPAP1P30533 357 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ATP1A4Q13733 1029 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 MTERF2Q49AM1 385 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SYTL3Q4VX76 610 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 C6orf132Q5T0Z8 1188 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 AADATQ8N5Z0 425 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 KBTBD8Q8NFY9 601 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 RNASE11Q8TAA1 199 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SENP7Q9BQF6 1050 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SAR1AQ9NR31 198 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 XPO7Q9UIA9 1087 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PNMA6EA0A0J9YXQ4 647 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 NDUFS3O75489 264 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ASNSP08243 561 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 FDFT1P37268 417 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PHKA2P46019 1235 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 STARP49675 285 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CCZ1BP86790 482 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CCZ1P86791 482 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 MAD2L1Q13257 205 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 NKX1-1Q15270 411 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 LRRC17Q8N6Y2 441 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 EXD1Q8NHP7 514 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 HPS1Q92902 700 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PGBD4Q96DM1 585 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 UGT2B28Q9BY64 529 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PRELID1Q9Y255 219 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CARD8Q9Y2G2 431 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TIMM44O43615 452 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CD58P19256 250 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TRAP1Q12931 704 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 EFR3AQ14156 821 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PROSER3Q2NL68 480 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TTLL9Q3SXZ7 439 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF57Q68EA5 555 aaPredicted RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PDXDC2PQ6P474 469 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TMPRSS6Q8IU80 811 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 PPIL6Q8IXY8 311 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC185Q8N715 623 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SNIP1Q8TAD8 396 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 MYCBPAPQ8TBZ2 947 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 MADDQ8WXG6 1647 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 STARD8Q92502 1023 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ERP44Q9BS26 406 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ZCCHC17Q9NP64 241 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TBC1D22BQ9NU19 505 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ATPIF1Q9UII2 106 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms