RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 SPARTQ8N0X7 666 aa7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 NKAPQ8N5F7 415 aaKnown RBP7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 MYCT1Q8N699 235 aa7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 DNAJB14Q8TBM8 379 aa7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 ZNF384Q8TF68 577 aa7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 CCT6BQ92526 530 aa7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 OSBPL9Q96SU4 736 aa7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 FAM83DQ9H4H8 585 aa7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 SERTAD3Q9UJW9 196 aa7.51□□□□□ -1.21
LPCAT3-213ENST00000620843 AQP12BA6NM10 295 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 LGALS16A8MUM7 142 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 CSF1RP07333 972 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 ZNF20P17024 532 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 KIAA0408Q6ZU52 694 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 FAM109AQ8N4B1 249 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 ATG16L2Q8NAA4 619 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 MYEOVQ96EZ4 313 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 RMDN3Q96TC7 470 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 NELL2Q99435 816 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 PCDHAC1Q9H158 963 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 GBA2Q9HCG7 927 aaPredicted RBP7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 NECTIN3Q9NQS3 549 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 IGSF9Q9P2J2 1179 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 ZMYND8Q9ULU4 1186 aaPredicted RBP7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 HPSEQ9Y251 543 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 SSX2IPQ9Y2D8 614 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 FER1L4A9Z1Z3 1794 aa7.5□□□□□ -1.21
LPCAT3-213ENST00000620843 PTPRMP28827 1452 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 TMEM200CA6NKL6 621 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 PIP5K1BO14986 540 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 NPC1O15118 1278 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 SPDEFO95238 335 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 C1SP09871 688 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 EGR1P18146 543 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 GRK6P43250 576 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 ADAM17P78536 824 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 FZD5Q13467 585 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 SPARCL1Q14515 664 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 C4orf46Q504U0 113 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 ARHGAP15Q53QZ3 475 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 ICE2Q659A1 982 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 RAP1GAP2Q684P5 730 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 TLDC1Q6P9B6 456 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 RNF207Q6ZRF8 634 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 CCDC28AQ8IWP9 274 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 MYRIPQ8NFW9 859 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 TMEM171Q8WVE6 324 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 FAM136AQ96C01 138 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 PLEKHG4BQ96PX9 1271 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 AMBRA1Q9C0C7 1298 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 LRFN1Q9P244 771 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 DKK2Q9UBU2 259 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 TSC22D4Q9Y3Q8 395 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 MYO5CQ9NQX4 1742 aa7.49□□□□□ -1.21
LPCAT3-213ENST00000620843 CD3EAPO15446 510 aaKnown RBP7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 LPXNO60711 386 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 PPP3CBP16298 524 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 ADORA2AP29274 412 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 TP53BP2Q13625 1128 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 MAPKAPK3Q16644 382 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 TIGD2Q4W5G0 525 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 FAXCQ5TGI0 409 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 MANEALQ5VSG8 457 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 CACNA2D3Q8IZS8 1091 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 SLC30A5Q8TAD4 765 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 LTV1Q96GA3 475 aaPredicted RBP7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 C1QTNF3Q9BXJ4 246 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 ACTRT3Q9BYD9 372 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 TPSD1Q9BZJ3 242 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 TRIM5Q9C035 493 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 LMTK3Q96Q04 1460 aa7.48□□□□□ -1.21
LPCAT3-213ENST00000620843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 EEA1Q15075 1411 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 PPM1DO15297 605 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 COQ9O75208 318 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 HGFP14210 728 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 PECAM1P16284 738 aaPredicted RBP7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 PDE6CP51160 858 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 SP2Q02086 613 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 GUCY1B3Q02153 619 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 CERCAMQ5T4B2 595 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 TMTC4Q5T4D3 741 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 DEPDC1Q5TB30 811 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 ARL6IP4Q66PJ3 421 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 MRNIPQ6NTE8 343 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 SPATA5Q8NB90 893 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 SSH3Q8TE77 659 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 STYXQ8WUJ0 223 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 FUBP1Q96AE4 644 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 SLC25A32Q9H2D1 315 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 ZBTB26Q9HCK0 441 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 AGO4Q9HCK5 861 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 DACT1Q9NYF0 836 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 GRHPRQ9UBQ7 328 aa7.47□□□□□ -1.21
LPCAT3-213ENST00000620843 HECW1Q76N89 1606 aa7.46□□□□□ -1.21
LPCAT3-213ENST00000620843 CENPVL1A0A0U1RR11 272 aa7.46□□□□□ -1.22
LPCAT3-213ENST00000620843 SYT5O00445 386 aa7.46□□□□□ -1.22
LPCAT3-213ENST00000620843 ACKR2O00590 384 aa7.46□□□□□ -1.22
LPCAT3-213ENST00000620843 PDHA1P08559 390 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms