RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 C2orf69Q8N8R5 385 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 TSSK1BQ9BXA7 367 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 SETD4Q9NVD3 440 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 NOP53Q9NZM5 478 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 HAUS5O94927 633 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 EPHX2P34913 555 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 HIRAP54198 1017 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 PPIL2Q13356 520 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 GRIK4Q16099 956 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 ARL13BQ3SXY8 428 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 SH3D19Q5HYK7 790 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 CRLF3Q8IUI8 442 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 CPXM1Q96SM3 734 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 FRMD8Q9BZ67 464 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 RNPEPQ9H4A4 650 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 CD248Q9HCU0 757 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 SNTG2Q9NY99 539 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 UBQLN1Q9UMX0 589 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 ATG7O95352 703 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 ABHD2P08910 425 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 SNRPAP09012 282 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 ELK3P41970 407 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 PSMC4P43686 418 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 SESN2P58004 480 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 SLC20A2Q08357 652 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 C15orf59Q2T9L4 293 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 EFHC2Q5JST6 749 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 C15orf39Q6ZRI6 1047 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 RPAINQ86UA6 219 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 NUDCD3Q8IVD9 361 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 KIAA0319LQ8IZA0 1049 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 OSMRQ99650 979 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 LHX5Q9H2C1 402 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 VTA1Q9NP79 307 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 PDLIM7Q9NR12 457 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 ABCF3Q9NUQ8 709 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 ACTL7BQ9Y614 415 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 SBF2Q86WG5 1849 aa9.6□□□□□ -0.87
RBFOX1-223ENST00000620507 FOXO6A8MYZ6 492 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 H3BRJ5 948 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 GYG2O15488 501 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 LRCH4O75427 683 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 RARBP10826 455 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 RPL22P35268 128 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 CDKN2BP42772 138 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 GCLCP48506 637 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 SULT1E1P49888 294 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 SMAD1Q15797 465 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 DCAF6Q58WW2 860 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 PID1Q7Z2X4 250 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 C1orf127Q8N9H9 656 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 TMEM174Q8WUU8 243 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 MANSC1Q9H8J5 431 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 PPARGC1AQ9UBK2 798 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 ATXN2Q99700 1313 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 CNTNAP2Q9UHC6 1331 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 TRIM49D1C9J1S8 452 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 GPR25O00155 361 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 CREB1P16220 341 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 ARF4P18085 180 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 ACADSBP45954 432 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 EMC10Q5UCC4 262 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 TRIM68Q6AZZ1 485 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 LMNTD2Q8IXW0 634 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 FUKQ8N0W3 1084 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 CCDC33Q8N5R6 958 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 SMCHD1A6NHR9 2005 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 SCN9AQ15858 1988 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 CCDC195A0A1B0GUA6 201 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 ARHGAP42A6NI28 874 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 PDHXO00330 501 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 STRNO43815 780 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 GRIN3BO60391 1043 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 PIAS1O75925 651 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 KITP10721 976 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 ZNF143P52747 638 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 OVGP1Q12889 678 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 DPYSL3Q14195 570 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 PRPSAP1Q14558 356 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 EFHC1Q5JVL4 640 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 METTL23Q86XA0 190 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 PDCD7Q8N8D1 485 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 NLGN2Q8NFZ4 835 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 FAM111AQ96PZ2 611 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 RXFP1Q9HBX9 757 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 SPDYE5A6NIY4 337 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 ALOX15BO15296 676 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 BANF1O75531 89 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 ARIH2O95376 493 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 TCF4P15884 667 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 TAF6P49848 677 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 MUM1Q2TAK8 710 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 NT5DC4Q86YG4 428 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 WDR75Q8IWA0 830 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 ZDHHC14Q8IZN3 488 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 CFAP61Q8NHU2 1237 aa9.59□□□□□ -0.87
RBFOX1-223ENST00000620507 NKD2Q969F2 451 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms