RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SPRP35270 261 aaPredicted RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 RAD51Q06609 339 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 KCNK16Q96T55 309 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 WDR18Q9BV38 432 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 ZFYVE28Q9HCC9 887 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 CISHQ9NSE2 258 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 PRMT7Q9NVM4 692 aaPredicted RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 PSMD10O75832 226 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 NPTXRO95502 500 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 CTSHP09668 335 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 FLT3P36888 993 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 CYTH1Q15438 398 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 CNGA2Q16280 664 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 PKN2Q16513 984 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 SLC30A9Q6PML9 568 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 MPZL3Q6UWV2 235 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 SEPT5Q99719 369 aaPredicted RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 LSM7Q9UK45 103 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 USP18Q9UMW8 372 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 EFCAB14O75071 495 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 CALB2P22676 271 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 TRIP10Q15642 601 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 C15orf52Q6ZUT6 534 aaKnown RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 FUKQ8N0W3 1084 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 EMC1Q8N766 993 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 RFWD2Q8NHY2 731 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 ART4Q93070 314 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 FRMD8Q9BZ67 464 aaPredicted RBP8.66□□□□□ -1.02
ALMS1-208ENST00000620466 PCDH9Q9HC56 1237 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 PCYOX1Q9UHG3 505 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 LRRC37A3O60309 1634 aa8.66□□□□□ -1.02
ALMS1-208ENST00000620466 RNF103-CHMP3A0A140T963 221 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 C3orf70A6NLC5 250 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 PSMD3O43242 534 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 PPP3CCP48454 512 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 MARSP56192 900 aaKnown RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 PDK1Q15118 436 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 PKN3Q6P5Z2 889 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ING2Q9H160 280 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ARFGEF2Q9Y6D5 1785 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ADRB2P07550 413 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ACADSP16219 412 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 PECAM1P16284 738 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 VCAM1P19320 739 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ACADSBP45954 432 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 MARCKSL1P49006 195 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 COPAP53621 1224 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ARSHQ5FYA8 562 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ERMARDQ5T6L9 678 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 HGSNATQ68CP4 663 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 POTEAQ6S8J7 498 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 MFN1Q8IWA4 741 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SAMD3Q8N6K7 520 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 AGBL3Q8NEM8 1001 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SLC7A14Q8TBB6 771 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ETNPPLQ8TBG4 499 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 PRCCQ92733 491 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 INPP4AQ96PE3 977 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SH3GL2Q99962 352 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 PDCD2LQ9BRP1 358 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SHCBP1LQ9BZQ2 653 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ACP6Q9NPH0 428 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 USP20Q9Y2K6 914 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 RGPD1P0DJD0 1748 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 MAGEA13PA6NCF6 341 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ZSCAN9O15535 394 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 GH1P01241 217 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SPATA31C1P0DKV0 1188 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 KCNA2P16389 499 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 DRD4P21917 467 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 FDFT1P37268 417 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 GCNT1Q02742 428 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 WASHC5Q12768 1159 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 PDAP1Q13442 181 aaKnown RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 DUPD1Q68J44 220 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SCUBE1Q8IWY4 988 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 B4GALNT2Q8NHY0 566 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 WDR48Q8TAF3 677 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 EPS8L1Q8TE68 723 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SEPT8Q92599 483 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 TTYH3Q9C0H2 523 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 DNPEPQ9ULA0 475 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SNX5Q9Y5X3 404 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 LOC100653049A0A140TA62 436 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SRRM3A6NNA2 597 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 AP3B1O00203 1094 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 KRT34O76011 436 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 NOL4O94818 638 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 VDRP11473 427 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 CHKAP35790 457 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ALDH5A1P51649 535 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 AUHQ13825 339 aaKnown RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 RRP1BQ14684 758 aaKnown RBP8.65□□□□□ -1.02
ALMS1-208ENST00000620466 RASA2Q15283 850 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 DCAF6Q58WW2 860 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 HYIQ5T013 277 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SAMD7Q7Z3H4 446 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 SNX31Q8N9S9 440 aa8.65□□□□□ -1.02
ALMS1-208ENST00000620466 ASAP3Q8TDY4 903 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms