RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CRTAC1Q9NQ79 661 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ARHGEF37A1IGU5 675 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 KRT10P13645 584 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 IL1R2P27930 398 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 CETN2P41208 172 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 PTGIRP43119 386 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ZNF143P52747 638 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ATP11AP98196 1134 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 UAP1Q16222 522 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 HADHQ16836 314 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 TTMPQ5BVD1 217 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 LRRC38Q5VT99 294 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 KCTD16Q68DU8 428 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 MFSD7Q6UXD7 560 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 IQCKQ8N0W5 287 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 URGCPQ8TCY9 931 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 SCLYQ96I15 445 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 SLITRK1Q96PX8 696 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 HNRNPABQ99729 332 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ELAC1Q9H777 363 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 KRT82Q9NSB4 513 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ASNSD1Q9NWL6 643 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 MYBPHLA2RUH7 354 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 C2CD4BA6NLJ0 364 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 B4GALT3O60512 393 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 BEST1O76090 585 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 HSD17B3P37058 310 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 RABGGTBP53611 331 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 SLC25A11Q02978 314 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 PPARDQ03181 441 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 RAB6CQ53S08 254 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 DNAJC21Q5F1R6 531 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 NOMO2Q5JPE7 1267 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 PIGZQ86VD9 579 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 METTL23Q86XA0 190 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 RCOR2Q8IZ40 523 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 SH2D3CQ8N5H7 860 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 RAPGEF5Q92565 580 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 RUFY1Q96T51 708 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 ERP44Q9BS26 406 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 CNPY3Q9BT09 278 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 DUSP16Q9BY84 665 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 PPP1R12CQ9BZL4 782 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 RAB6CQ9H0N0 254 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 CYLDQ9NQC7 956 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 R3HDM2Q9Y2K5 976 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 XPO1O14980 1071 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 DDHD2O94830 711 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 NPR3P17342 541 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 MIPP30301 263 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 COILP38432 576 aaPredicted RBP13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 OR1G1P47890 313 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 CCL23P55773 120 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 MAP3K7CLP57077 242 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 ADIGQ0VDE8 80 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 DHX34Q14147 1143 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 GPNMBQ14956 572 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 PKN2Q16513 984 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 ALS2CLQ60I27 953 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 PAQR9Q6ZVX9 377 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 SEC14L1Q92503 715 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 HSPH1Q92598 858 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 SH3GL2Q99962 352 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 CHST7Q9NS84 486 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 DDX56Q9NY93 547 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 PLAAQ9Y263 795 aa13.32□□□□□ -0.28
TNFAIP3-209ENST00000619035 KRT7P08729 469 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 FAM200BP0CF97 657 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 PCSK1P29120 753 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 SDC4P31431 198 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 HSPA9P38646 679 aaKnown RBP13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 PLTPP55058 493 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 PLEKHG4Q58EX7 1191 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 SCYL2Q6P3W7 929 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 FBXO46Q6PJ61 603 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 CD300LGQ6UXG3 332 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 SPOCD1Q6ZMY3 1216 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 CTU1Q7Z7A3 348 aaKnown RBP13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 ZDHHC17Q8IUH5 632 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 ABI1Q8IZP0 508 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 MREGQ8N565 214 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 GOLGA6L1Q8N7Z2 621 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 SEPT8Q92599 483 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 EXOC4Q96A65 974 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 FAM193BQ96PV7 902 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 RAB17Q9H0T7 212 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 HIPK3Q9H422 1215 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 LRRC4CQ9HCJ2 640 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 NGRNQ9NPE2 291 aaKnown RBP13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 TBC1D13Q9NVG8 400 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 CDH9Q9ULB4 789 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 USP18Q9UMW8 372 aa13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 PRG3Q9Y2Y8 225 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-209ENST00000619035 GOLGA6CA6NDK9 693 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms