RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 TOM1L1O75674 476 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 TJP3O95049 919 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CBX6O95503 412 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 IFNB1P01574 187 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PRKCBP05771 671 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CALB1P05937 261 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 NFICP08651 508 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 RPSAP08865 295 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SRGAP2CP0DJJ0 459 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CXCL8P10145 99 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 TARSP26639 723 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ATP5DP30049 168 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CDC25CP30307 473 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ELF1P32519 619 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 MSH2P43246 934 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 YARSP54577 528 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CCDC15Q0P6D6 951 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 LAMTOR4Q0VGL1 99 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 NEDD9Q14511 834 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 STXBP2Q15833 593 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 GNPTABQ3T906 1256 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SLFN12LQ6IEE8 588 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ZPBP2Q6X784 338 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PPP1R21Q6ZMI0 780 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ARHGEF18Q6ZSZ5 1173 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SH2D5Q6ZV89 423 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 BBS12Q6ZW61 710 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 XYLT1Q86Y38 959 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 RIBC1Q8N443 379 aaPredicted RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 C1orf127Q8N9H9 656 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SLC4A11Q8NBS3 891 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 RNF149Q8NC42 400 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 BBOF1Q8ND07 529 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 RFWD2Q8NHY2 731 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 NSMCE1Q8WV22 266 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CDHR1Q96JP9 859 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 SERAC1Q96JX3 654 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CFAP57Q96MR6 1250 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 MYCBPQ99417 103 aaPredicted RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PAFAH2Q99487 392 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PAIP2Q9BPZ3 127 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 TRIM56Q9BRZ2 755 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 PITPNM3Q9BZ71 974 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 ELOVL4Q9GZR5 314 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 CXCL16Q9H2A7 254 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 VPS37BQ9H9H4 285 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 METTL5Q9NRN9 209 aaKnown RBP4.53□□□□□ -1.68
SEC22B-202ENST00000618538 HAO1Q9UJM8 370 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 STK38LQ9Y2H1 464 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 STARD13Q9Y3M8 1113 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 GJA3Q9Y6H8 435 aa4.53□□□□□ -1.68
SEC22B-202ENST00000618538 C2orf71A6NGG8 1288 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 SIGLEC16A6NMB1 481 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 FZD9O00144 591 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 GPR25O00155 361 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 PIK3R2O00459 728 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 OGTO15294 1046 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 PEX11AO75192 247 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 AVILO75366 819 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 CNMDO75829 334 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 STAM2O75886 525 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 FAM155BO75949 473 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 ANP32DO95626 131 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 LDHAP00338 332 aaKnown RBP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 KRT4P19013 534 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 CA4P22748 312 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 EIF4BP23588 611 aaKnown RBP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 KDELR1P24390 212 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 PSMA2P25787 234 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 RFC5P40937 340 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 ETV4P43268 484 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 GCLCP48506 637 aaPredicted RBP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 STAT5BP51692 787 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 SLC18A1P54219 525 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 TFAMQ00059 246 aaKnown RBP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 OVGP1Q12889 678 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 GRM1Q13255 1194 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 PIGHQ14442 188 aaPredicted RBP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 RASA2Q15283 850 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 HIF1AQ16665 826 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF699Q32M78 642 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 MAP1SQ66K74 1059 aaPredicted RBP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF772Q68DY9 489 aaPredicted RBP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 DCUN1D2Q6PH85 259 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 LVRNQ6Q4G3 990 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 POTEAQ6S8J7 498 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 LBX2Q6XYB7 198 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 POLNQ7Z5Q5 900 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 PRPF39Q86UA1 669 aaKnown RBP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 RHPN2Q8IUC4 686 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 THNSL1Q8IYQ7 743 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 ANKRD35Q8N283 1001 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 BANPQ8N9N5 519 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 FAM71DQ8N9W8 422 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 TMEM35BQ8NCS4 154 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 FBXO36Q8NEA4 188 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.52□□□□□ -1.69
SEC22B-202ENST00000618538 FBF1Q8TES7 1133 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 JDP2Q8WYK2 163 aa4.52□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF75CPQ92670 426 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 313 ms