RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
CPEB1-216ENST00000618449 EPB41L4BQ9H329 900 aa11.83□□□□□ -0.52
CPEB1-216ENST00000618449 MTRF1LQ9UGC7 380 aaKnown RBP11.83□□□□□ -0.52
CPEB1-216ENST00000618449 OGDHLQ9ULD0 1010 aa11.83□□□□□ -0.52
CPEB1-216ENST00000618449 TIMM13Q9Y5L4 95 aaPredicted RBP11.83□□□□□ -0.52
CPEB1-216ENST00000618449 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.83□□□□□ -0.52
CPEB1-216ENST00000618449 GABBR2O75899 941 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 FAM163BP0C2L3 166 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 SETSIPP0DME0 302 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 TKTP29401 623 aaKnown RBP11.82□□□□□ -0.52
CPEB1-216ENST00000618449 IFFO1Q0D2I5 559 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 GPNMBQ14956 572 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 PAN2Q504Q3 1202 aaKnown RBP11.82□□□□□ -0.52
CPEB1-216ENST00000618449 TIGD5Q53EQ6 642 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 KIAA0319Q5VV43 1072 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 OR6B2Q6IFH4 312 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 TMEM110Q86TL2 294 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 KATNAL2Q8IYT4 538 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 ARFGAP2Q8N6H7 521 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 BCAS4Q8TDM0 211 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 FNIP1Q8TF40 1166 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 C1orf54Q8WWF1 131 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 SEZ6LQ9BYH1 1024 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 DDX43Q9NXZ2 648 aaKnown RBP11.82□□□□□ -0.52
CPEB1-216ENST00000618449 RRP15Q9Y3B9 282 aaKnown RBP11.82□□□□□ -0.52
CPEB1-216ENST00000618449 I3L4J1 428 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 NBNO60934 754 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 B3GAT3O94766 335 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 EOMESO95936 686 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 CDR1P51861 262 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 GUCY1A3Q02108 690 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 BST2Q10589 180 aaKnown RBP11.82□□□□□ -0.52
CPEB1-216ENST00000618449 TUSC3Q13454 348 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 PPP1R7Q15435 360 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 DENND2CQ68D51 928 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 TXNRD3NBQ6F5E7 133 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 SRLQ86TD4 932 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 SCUBE3Q8IX30 993 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 ARFGAP1Q8N6T3 406 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 SLCO2A1Q92959 643 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 HERPUD2Q9BSE4 406 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 FAM129AQ9BZQ8 928 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 DNAI2Q9GZS0 605 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 MIS12Q9H081 205 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 PABPC3Q9H361 631 aaKnown RBP11.82□□□□□ -0.52
CPEB1-216ENST00000618449 RABEP2Q9H5N1 569 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 KLHL11Q9NVR0 708 aa11.82□□□□□ -0.52
CPEB1-216ENST00000618449 BCCIPQ9P287 314 aaKnown RBP eCLIP11.82□□□□□ -0.52
CPEB1-216ENST00000618449 TDRD15B5MCY1 1934 aaKnown RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 MYO1CO00159 1063 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 PQBP1O60828 265 aaKnown RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 LRCH4O75427 683 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 NUDT17P0C025 328 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 PTPN1P18031 435 aaKnown RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 LSP1P33241 339 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 MDH1P40925 334 aaKnown RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 CCT5P48643 541 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 BCAT1P54687 386 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 FAM189BP81408 668 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 BFSP2Q13515 415 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 CD300LGQ6UXG3 332 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 HOOK3Q86VS8 718 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 CCDC50Q8IVM0 306 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 FUKQ8N0W3 1084 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 TMEM86AQ8N2M4 240 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 STK32AQ8WU08 396 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 MYCBPQ99417 103 aaPredicted RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 B3GNT5Q9BYG0 378 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 LRRC4CQ9HCJ2 640 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 WBP1LQ9NX94 342 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 INPPL1O15357 1258 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 PAPSS1O43252 624 aaPredicted RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 GRAP2O75791 330 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 BRCC3P46736 316 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 LHX1P48742 406 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 KRT17Q04695 432 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 SNX1Q13596 522 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 TAF5Q15542 800 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 CLLU1OSQ5K130 101 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 LRRC38Q5VT99 294 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 TRNP1Q6NT89 227 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 GLB1LQ6UWU2 654 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 OLFML1Q6UWY5 402 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 ANKS1BQ7Z6G8 1248 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 DBF4BQ8NFT6 615 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 EXD1Q8NHP7 514 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 HASPINQ8TF76 798 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 ART4Q93070 314 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 HNRNPABQ99729 332 aaKnown RBP11.81□□□□□ -0.52
CPEB1-216ENST00000618449 FTHL17Q9BXU8 183 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 CHST7Q9NS84 486 aa11.81□□□□□ -0.52
CPEB1-216ENST00000618449 F8W810 466 aa11.8□□□□□ -0.52
CPEB1-216ENST00000618449 CLDN5O00501 218 aa11.8□□□□□ -0.52
CPEB1-216ENST00000618449 SHBGP04278 402 aa11.8□□□□□ -0.52
CPEB1-216ENST00000618449 RALAP11233 206 aa11.8□□□□□ -0.52
CPEB1-216ENST00000618449 MDH1BQ5I0G3 518 aa11.8□□□□□ -0.52
CPEB1-216ENST00000618449 PAQR9Q6ZVX9 377 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms