RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 GRIK2Q13002 908 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 SUZ12Q15022 739 aaKnown RBP8.35□□□□□ -1.07
CBWD1-227ENST00000618361 ZNF174Q15697 407 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 INTS6LQ5JSJ4 861 aaKnown RBP8.35□□□□□ -1.07
CBWD1-227ENST00000618361 SDHAF4Q5VUM1 108 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 KRT79Q5XKE5 535 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 RHBDF2Q6PJF5 856 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 FILIP1Q7Z7B0 1213 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.07
CBWD1-227ENST00000618361 RGL4Q8IZJ4 473 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 TMEM86AQ8N2M4 240 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 PHTF2Q8N3S3 785 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 DEFB119Q8N690 84 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 C4orf32Q8N8J7 132 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 SYT2Q8N9I0 419 aaPredicted RBP8.35□□□□□ -1.07
CBWD1-227ENST00000618361 ENGASEQ8NFI3 743 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 PIP4K2CQ8TBX8 421 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 OTUB2Q96DC9 234 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 SPATA17Q96L03 361 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 ZNF560Q96MR9 790 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 PKMYT1Q99640 499 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 FOXP1Q9H334 677 aaPredicted RBP8.35□□□□□ -1.07
CBWD1-227ENST00000618361 DPP3Q9NY33 737 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 PLXND1Q9Y4D7 1925 aa8.35□□□□□ -1.07
CBWD1-227ENST00000618361 ATG2BQ96BY7 2078 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 APC2O95996 2303 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 TEX51A0A1B0GUA7 166 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 A0A1W2PQF6 199 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 TBC1D3BA6NDS4 549 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 HNRNPDLO14979 420 aaKnown RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 HOXC11O43248 304 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 NDUFS2O75306 463 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 ADH5P11766 374 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 HOXB2P14652 356 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 CYP2F1P24903 491 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 NTSR1P30989 418 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 CDR1P51861 262 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 ATP2C1P98194 919 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 MYL7Q01449 175 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 CFHR1Q03591 330 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 GAD2Q05329 585 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 MESP2Q0VG99 397 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 SMAD1Q15797 465 aaKnown RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 TTC38Q5R3I4 469 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 VSTM1Q6UX27 236 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 METTL3Q86U44 580 aaKnown RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 C12orf40Q86WS4 652 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 SPATA2LQ8IUW3 424 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 LURAP1LQ8IV03 231 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 SFTPA1Q8IWL2 248 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 ETFBKMTQ8IXQ9 262 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 PDCL2Q8N4E4 241 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 ZNF513Q8N8E2 541 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 NSUN7Q8NE18 718 aaKnown RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 STKLD1Q8NE28 680 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 CADM4Q8NFZ8 388 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 FAM212AQ96EL1 285 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 CRELD1Q96HD1 420 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 MSTO1Q9BUK6 570 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 CD248Q9HCU0 757 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 TM7SF3Q9NS93 570 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 DDX43Q9NXZ2 648 aaKnown RBP8.34□□□□□ -1.07
CBWD1-227ENST00000618361 TRPM5Q9NZQ8 1165 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 GTF3C4Q9UKN8 822 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 PTPRDP23468 1912 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 GON4LQ3T8J9 2241 aa8.34□□□□□ -1.07
CBWD1-227ENST00000618361 PLXNB3Q9ULL4 1909 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 E2F8A0AVK6 867 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 ZNF840PA6NDX5 716 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 LAD1O00515 517 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 GABRDO14764 452 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 TNFSF14O43557 240 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 HUS1O60921 280 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 HLA-EP13747 358 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 NDUFV2P19404 249 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 PCSK1P29120 753 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 EIF2S3P41091 472 aaKnown RBP8.33□□□□□ -1.08
CBWD1-227ENST00000618361 MATKP42679 507 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 LHX1P48742 406 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 SLC12A3P55017 1021 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 HYIQ5T013 277 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 BTBD8Q5XKL5 378 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 SLFN12LQ6IEE8 588 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 SDE2Q6IQ49 451 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 FAM171BQ6P995 826 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 C4orf50Q6ZRC1 276 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 DENND5BQ6ZUT9 1274 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 CENPQQ7L2Z9 268 aaPredicted RBP8.33□□□□□ -1.08
CBWD1-227ENST00000618361 GPR155Q7Z3F1 870 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 KCNK18Q7Z418 384 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 TMPRSS12Q86WS5 348 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 KRI1Q8N9T8 703 aaKnown RBP8.33□□□□□ -1.08
CBWD1-227ENST00000618361 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 IPO4Q8TEX9 1081 aaKnown RBP8.33□□□□□ -1.08
CBWD1-227ENST00000618361 GTF3C6Q969F1 213 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 MS4A3Q96HJ5 214 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 GABRG3Q99928 467 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 TTLL2Q9BWV7 592 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 GAREM1Q9H706 876 aa8.33□□□□□ -1.08
CBWD1-227ENST00000618361 GDAP2Q9NXN4 497 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms