RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 V9GYY5 206 aaPredicted RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 RHOXF2BP0C7M4 288 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 BRD2P25440 801 aaKnown RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 BCL2L1Q07817 233 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 PDAP1Q13442 181 aaKnown RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 HABP4Q5JVS0 413 aaKnown RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RMDN2Q96LZ7 410 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 PNKPQ96T60 521 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RHOXF2Q9BQY4 288 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RIOX1Q9H6W3 641 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 VPS51Q9UID3 782 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 BARX2Q9UMQ3 279 aaPredicted RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 PCDHB3Q9Y5E6 796 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 SETSIPP0DME0 302 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 ADKP55263 362 aaKnown RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 ATP2C1P98194 919 aaPredicted RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 GPR135Q8IZ08 494 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 PDIK1LQ8N165 341 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 SFXN1Q9H9B4 322 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 ITGALP20701 1170 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RBMS1P29558 406 aaKnown RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 PSMD8P48556 350 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 POU5F1BQ06416 359 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 FOXD4Q12950 439 aaPredicted RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 NCAPHQ15003 741 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 NUP93Q8N1F7 819 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 HJURPQ8NCD3 748 aaPredicted RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 SUN3Q8TAQ9 357 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 ABI3Q9P2A4 366 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 SLC16A3O15427 465 aaKnown RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 MAPK8P45983 427 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RAP1GAPP47736 663 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 MMEL1Q495T6 779 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 PRPF38BQ5VTL8 546 aaKnown RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 MARK2Q7KZI7 788 aaKnown RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 FRMD5Q7Z6J6 570 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 SPATA24Q86W54 205 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 WDR41Q9HAD4 459 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 SUSD2Q9UGT4 822 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 MRFAP1Q9Y605 127 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RAMP2O60895 175 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RPN2P04844 631 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 RB1P06400 928 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 MAGEA10P43363 369 aaPredicted RBP11.37□□□□□ -0.59
POLR2A-209ENST00000617998 SIRT2Q8IXJ6 389 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 IPMKQ8NFU5 416 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 GDPD5Q8WTR4 605 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 CARD6Q9BX69 1037 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 ZNHIT2Q9UHR6 403 aa11.37□□□□□ -0.59
POLR2A-209ENST00000617998 TIE1P35590 1138 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 CAPZA2P47755 286 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 RBBP7Q16576 425 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 CYP2U1Q7Z449 544 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 CBX8Q9HC52 389 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 LIMD1Q9UGP4 676 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 ITGAVP06756 1048 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 RARGP13631 454 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 HPGDP15428 266 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 AKT2P31751 481 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 ATP6V1E1P36543 226 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 BRCC3P46736 316 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 RCN2Q14257 317 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 TTC7BQ86TV6 843 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 MCCC1Q96RQ3 725 aaPredicted RBP11.36□□□□□ -0.59
POLR2A-209ENST00000617998 CDH9Q9ULB4 789 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 TDRKHQ9Y2W6 561 aaKnown RBP11.36□□□□□ -0.59
POLR2A-209ENST00000617998 ANP32DO95626 131 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 SERPINA4P29622 427 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 SULT2A1Q06520 285 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 PDK1Q15118 436 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 TIGD7Q6NT04 549 aaPredicted RBP11.36□□□□□ -0.59
POLR2A-209ENST00000617998 ZNF852Q6ZMS4 543 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 SYT2Q8N9I0 419 aaPredicted RBP11.36□□□□□ -0.59
POLR2A-209ENST00000617998 MYLIPQ8WY64 445 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 SLC13A1Q9BZW2 595 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.36□□□□□ -0.59
POLR2A-209ENST00000617998 ECEL1O95672 775 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 JUPP14923 745 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 CHRM3P20309 590 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 GPATCH11Q8N954 259 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 STRADBQ9C0K7 418 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 PLEKHA4Q9H4M7 779 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 PKD2L2Q9NZM6 624 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 COG5Q9UP83 839 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 AHDC1Q5TGY3 1603 aaPredicted RBP11.36□□□□□ -0.59
POLR2A-209ENST00000617998 POC1B-GALNT4F8VUJ3 575 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 SLURP2P0DP57 97 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 ALKBH5Q6P6C2 394 aaKnown RBP11.36□□□□□ -0.59
POLR2A-209ENST00000617998 TUBB4BP68371 445 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 TAF8Q7Z7C8 310 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 BLOC1S5Q8TDH9 187 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 HEMGNQ9BXL5 484 aa11.36□□□□□ -0.59
POLR2A-209ENST00000617998 KIF3CO14782 793 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 TUBB4AP04350 444 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 JMJD7P0C870 316 aa11.35□□□□□ -0.59
POLR2A-209ENST00000617998 ZPBP2Q6X784 338 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms