RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 NIPA2Q8N8Q9 360 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 C12orf29Q8N999 325 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 CCDC26Q8TAB7 109 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 SLC2A14Q8TDB8 520 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 RBM41Q96IZ5 413 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 SAMD11Q96NU1 681 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 CPXM1Q96SM3 734 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 YME1L1Q96TA2 773 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 DUSP16Q9BY84 665 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 LRRC4Q9HBW1 653 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 TBC1D13Q9NVG8 400 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 COL4A6Q14031 1691 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 TRIP11Q15643 1979 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 FAM170AA1A519 330 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 TARSL2A2RTX5 802 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 KRIT1O00522 736 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 SYN3O14994 580 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 DDX3YO15523 660 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 PDE4CQ08493 712 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 DSC1Q08554 894 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 ELF2Q15723 593 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 MAP9Q49MG5 647 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 TIGD5Q53EQ6 642 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 EFHC1Q5JVL4 640 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 CLLU1OSQ5K130 101 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 CYP4A22Q5TCH4 519 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 C8orf74Q6P047 294 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 PHLDB2Q86SQ0 1253 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 TMEM110Q86TL2 294 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 LRRC43Q8N309 656 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 MYCBPAPQ8TBZ2 947 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 SLC35F5Q8WV83 523 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 KHSRPQ92945 711 aaKnown RBP eCLIP17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 MRPL38Q96DV4 380 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 TRIM62Q9BVG3 475 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 SLC4A5Q9BY07 1137 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 GOLPH3Q9H4A6 298 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 CD320Q9NPF0 282 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 HOMER3Q9NSC5 361 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 USTQ9Y2C2 406 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 FAN1Q9Y2M0 1017 aa17.63■□□□□ 0.41
TRAPPC3-210ENST00000617904 H3BNC9 293 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 FBXO21O94952 628 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 ERBB2P04626 1255 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 FGFR1P11362 822 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 NPR3P17342 541 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 GPD1P21695 349 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 LMO2P25791 158 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 PLA2G4AP47712 749 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 SLC6A3Q01959 620 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 SMC1AQ14683 1233 aaKnown RBP17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 LEXMQ3ZCV2 418 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 PKDCCQ504Y2 493 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 MDH1BQ5I0G3 518 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 CC2D1AQ6P1N0 951 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 MAATS1Q7Z4T9 603 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 COLGALT2Q8IYK4 626 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 SIX6OS1Q8N1H7 587 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 TMEM130Q8N3G9 435 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 LINC01599Q8WXQ3 324 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 SMARCD1Q96GM5 515 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 UBXN6Q9BZV1 441 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 DPEP3Q9H4B8 488 aa17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 METTL5Q9NRN9 209 aaKnown RBP17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 V9GYY5 206 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 TDRD15B5MCY1 1934 aaKnown RBP17.62■□□□□ 0.41
TRAPPC3-210ENST00000617904 SF3B1O75533 1304 aaKnown RBP eCLIP17.61■□□□□ 0.416e-6■■■■■ 103.4
TRAPPC3-210ENST00000617904 E5RJQ4 531 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 H7C4K7 107 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 ZRANB2O95218 330 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 FGGP02679 453 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 CCDC130P13994 396 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 COPS2P61201 443 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 GPM6BQ13491 265 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 PTPROQ16827 1216 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 C2CD6Q53TS8 623 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 INTS6LQ5JSJ4 861 aaKnown RBP17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 PPP1R15BQ5SWA1 713 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 ARCQ7LC44 396 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 POLNQ7Z5Q5 900 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 OSTM1Q86WC4 334 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 TTC30AQ86WT1 665 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 CCDC50Q8IVM0 306 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 RCOR2Q8IZ40 523 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 KCTD13Q8WZ19 329 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 CD101Q93033 1021 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 BTBD6Q96KE9 485 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 CNPY3Q9BT09 278 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 SLITRK6Q9H5Y7 841 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 MYH10P35580 1976 aa17.61■□□□□ 0.41
TRAPPC3-210ENST00000617904 NLRC5Q86WI3 1866 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 SCN1AP35498 2009 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 KCNA5P22460 613 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 SDC4P31431 198 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 AFF1P51825 1210 aaKnown RBP17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 C2orf54Q08AI8 447 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 SMARCB1Q12824 385 aa17.6■□□□□ 0.41
TRAPPC3-210ENST00000617904 BRD3Q15059 726 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms