RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 BEST1O76090 585 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 VNN2O95498 520 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 RB1P06400 928 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 PTPN9P43378 593 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 ZNF143P52747 638 aaPredicted RBP12.34□□□□□ -0.43
PDPN-211ENST00000617617 NAP1L1P55209 391 aaKnown RBP12.34□□□□□ -0.43
PDPN-211ENST00000617617 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 CLUL1Q15846 466 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 CYP4A22Q5TCH4 519 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 PEX26Q7Z412 305 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.34□□□□□ -0.43
PDPN-211ENST00000617617 CENPIQ92674 756 aaPredicted RBP12.34□□□□□ -0.43
PDPN-211ENST00000617617 SLC2A13Q96QE2 648 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 SYNCQ9H7C4 482 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 TJP2Q9UDY2 1190 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 PCDHA3Q9Y5H8 950 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 ANAPC1Q9H1A4 1944 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 CCDC66A2RUB6 948 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 DAB1O75553 588 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 PEX5P50542 639 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
PDPN-211ENST00000617617 ITIH3Q06033 890 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 PSMD5Q16401 504 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 NT5C3BQ969T7 300 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 MTMR11A4FU01 709 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 HSF2BPO75031 334 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 CTSAP10619 480 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 HAPLN1P10915 354 aaPredicted RBP12.33□□□□□ -0.43
PDPN-211ENST00000617617 PCK1P35558 622 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 KRT17Q04695 432 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 RAB33AQ14088 237 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 RPS6KA1Q15418 735 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 SLC39A12Q504Y0 691 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 DNTTIP2Q5QJE6 756 aaKnown RBP12.33□□□□□ -0.43
PDPN-211ENST00000617617 RSPO2Q6UXX9 243 aaPredicted RBP12.33□□□□□ -0.43
PDPN-211ENST00000617617 RTL10Q7L3V2 364 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 BHLHA9Q7RTU4 235 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 POLNQ7Z5Q5 900 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 RASGEF1CQ8N431 466 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 FBXO22Q8NEZ5 403 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 RRN3Q9NYV6 651 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.43
PDPN-211ENST00000617617 ZMYND8Q9ULU4 1186 aaPredicted RBP12.33□□□□□ -0.43
PDPN-211ENST00000617617 PCDHA11Q9Y5I1 949 aa12.33□□□□□ -0.43
PDPN-211ENST00000617617 NT5C1B-RDH14C9J2C7 533 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 ENDOD1O94919 500 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 SYN1P17600 705 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 COMTP21964 271 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 BMPR1AP36894 532 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 TERF1P54274 439 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 CACNA2D1P54289 1103 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 MAP3K7CLP57077 242 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 RPL7AP62424 266 aaKnown RBP12.33□□□□□ -0.44
PDPN-211ENST00000617617 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 TMCO2Q7Z6W1 182 aaPredicted RBP12.33□□□□□ -0.44
PDPN-211ENST00000617617 ZNF276Q8N554 614 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 DPF3Q92784 378 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 MCEEQ96PE7 176 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 OSBPL9Q96SU4 736 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 CNPY3Q9BT09 278 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 CARD9Q9H257 536 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 FSCN2O14926 492 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 FGF18O76093 207 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 BDNFP23560 247 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 BMP8BP34820 402 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 RFC1P35251 1148 aaPredicted RBP12.33□□□□□ -0.44
PDPN-211ENST00000617617 DAOAP59103 153 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 OGDHQ02218 1023 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 SPOUT1Q5T280 376 aaKnown RBP12.33□□□□□ -0.44
PDPN-211ENST00000617617 VSIG1Q86XK7 387 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
PDPN-211ENST00000617617 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
PDPN-211ENST00000617617 METTL5Q9NRN9 209 aaKnown RBP12.33□□□□□ -0.44
PDPN-211ENST00000617617 TLL1O43897 1013 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 GPD1P21695 349 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 PTPN7P35236 360 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 PBX3P40426 434 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 MAGEA10P43363 369 aaPredicted RBP12.32□□□□□ -0.44
PDPN-211ENST00000617617 TUBB4BP68371 445 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 MESDQ14696 234 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 FAM102AQ5T9C2 384 aaPredicted RBP12.32□□□□□ -0.44
PDPN-211ENST00000617617 OR6B2Q6IFH4 312 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 PDE12Q6L8Q7 609 aaKnown RBP12.32□□□□□ -0.44
PDPN-211ENST00000617617 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 DCUN1D2Q6PH85 259 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 UBL4BQ8N7F7 174 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 ACTRT1Q8TDG2 376 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 PGAP3Q96FM1 320 aaPredicted RBP12.32□□□□□ -0.44
PDPN-211ENST00000617617 LRRC4Q9HBW1 653 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 SCML2Q9UQR0 700 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 FTCDO95954 541 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 URODP06132 367 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 RGS7P49802 495 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 TKTL1P51854 596 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 ADIGQ0VDE8 80 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 C2CD6Q53TS8 623 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 CEP57Q86XR8 500 aa12.32□□□□□ -0.44
PDPN-211ENST00000617617 KATNAL2Q8IYT4 538 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms