RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 DPEP3Q9H4B8 488 aa10.28□□□□□ -0.76
TARDBP-218ENST00000617172 DMAP1Q9NPF5 467 aaPredicted RBP10.28□□□□□ -0.76
TARDBP-218ENST00000617172 SLC8A2Q9UPR5 921 aa10.28□□□□□ -0.76
TARDBP-218ENST00000617172 NME7Q9Y5B8 376 aa10.28□□□□□ -0.76
TARDBP-218ENST00000617172 GVINP1Q7Z2Y8 2422 aa10.28□□□□□ -0.76
TARDBP-218ENST00000617172 PRR5-ARHGAP8B1AHC4 643 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 LEFTY2O00292 366 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 CLDN5O00501 218 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 LRP3O75074 770 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 OLFM2O95897 454 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 ABL1P00519 1130 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 OAS1P00973 400 aaKnown RBP10.27□□□□□ -0.77
TARDBP-218ENST00000617172 RETP07949 1114 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 GTF2H1P32780 548 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 PIK3CAP42336 1068 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 FNTBP49356 437 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 TUBP50607 506 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 MCCD1P59942 119 aaPredicted RBP10.27□□□□□ -0.77
TARDBP-218ENST00000617172 NUCB2P80303 420 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 ARHGAP8P85298 464 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 SIM2Q14190 667 aaPredicted RBP10.27□□□□□ -0.77
TARDBP-218ENST00000617172 PUM1Q14671 1186 aaKnown RBP eCLIP10.27□□□□□ -0.77
TARDBP-218ENST00000617172 EDRF1Q3B7T1 1238 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 SNX30Q5VWJ9 437 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 FSTL4Q6MZW2 842 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 WDR5BQ86VZ2 330 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 ADGRG2Q8IZP9 1017 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 TTC39CQ8N584 583 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 RIN3Q8TB24 985 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 CD101Q93033 1021 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 KCNK16Q96T55 309 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 FBXO44Q9H4M3 255 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 SMYD3Q9H7B4 428 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 CYP3A43Q9HB55 503 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 RMND1Q9NWS8 449 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 IL37Q9NZH6 218 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 TBC1D14Q9P2M4 693 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 FRYLO94915 3013 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 TCHHQ07283 1943 aa10.27□□□□□ -0.77
TARDBP-218ENST00000617172 WDR87Q6ZQQ6 2873 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 FAM92AA1XBS5 289 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 TNFRSF10BO14763 440 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 HRO43593 1189 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 STX10O60499 249 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 FOXD2O60548 495 aaPredicted RBP10.26□□□□□ -0.77
TARDBP-218ENST00000617172 AP1G2O75843 785 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 AKAP3O75969 853 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 HLA-DRAP01903 254 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 NDST1P52848 882 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 CACNA2D1P54289 1103 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 LMNB2Q03252 620 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 HECTD3Q5T447 861 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 PRR23BQ6ZRT6 265 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 PAQR9Q6ZVX9 377 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 ACOT1Q86TX2 421 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 FAM186BQ8IYM0 893 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 FUKQ8N0W3 1084 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 FBXO32Q969P5 355 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 OTUB2Q96DC9 234 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 CHFRQ96EP1 664 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 CHAMP1Q96JM3 812 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 GSDMAQ96QA5 445 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 NT5C1AQ9BXI3 368 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 RNF38Q9H0F5 515 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 SDCBP2Q9H190 292 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 LINC00597Q9H2U6 94 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 GOLPH3LQ9H4A5 285 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 FAM124BQ9H5Z6 455 aaPredicted RBP10.26□□□□□ -0.77
TARDBP-218ENST00000617172 CSNK1G1Q9HCP0 422 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 HOOK1Q9UJC3 728 aaKnown RBP10.26□□□□□ -0.77
TARDBP-218ENST00000617172 MAPK8IP1Q9UQF2 711 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 TICRRQ7Z2Z1 1910 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 COL4A2P08572 1712 aa10.26□□□□□ -0.77
TARDBP-218ENST00000617172 NUP210Q8TEM1 1887 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-218ENST00000617172 E2F8A0AVK6 867 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 CETN3O15182 167 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 RNF40O75150 1001 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 SMC2O95347 1197 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 EGFP01133 1207 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 PRR29P0C7W0 189 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 MBL2P11226 248 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-218ENST00000617172 EIF2DP41214 584 aaKnown RBP10.25□□□□□ -0.77
TARDBP-218ENST00000617172 ASPAP45381 313 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 RAP1GAPP47736 663 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 GCLMP48507 274 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 SLC5A3P53794 718 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 ZXDBP98169 803 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 INCA1Q0VD86 236 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 IFRD2Q12894 506 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-218ENST00000617172 PREPLQ4J6C6 727 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-218ENST00000617172 ZCWPW2Q504Y3 356 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 COBLL1Q53SF7 1204 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 C1orf220Q5T0J3 134 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 KRT39Q6A163 491 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 HEATR6Q6AI08 1181 aaKnown RBP10.25□□□□□ -0.77
TARDBP-218ENST00000617172 SCARA5Q6ZMJ2 495 aa10.25□□□□□ -0.77
TARDBP-218ENST00000617172 CEP68Q76N32 757 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms