RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SPAG6O75602 509 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 HSPA4LO95757 839 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 SNRPAP09012 282 aaKnown RBP13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 KDELR1P24390 212 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 SSTR1P30872 391 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 BST2Q10589 180 aaKnown RBP13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 MTHFD1LQ6UB35 978 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 LRRC6Q86X45 466 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 BORCS6Q96GS4 357 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 KLC4Q9NSK0 619 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 SHOC2Q9UQ13 582 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 TRIM49D1C9J1S8 452 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 GYG2O15488 501 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 RASSF3Q86WH2 238 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 ZC3H15Q8WU90 426 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 MX2P20592 715 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 YY1P25490 414 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 RPS6KA2Q15349 733 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 TAF1BQ53T94 588 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 MROH9Q5TGP6 573 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 PCMTD2Q9NV79 361 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 CTNNAL1Q9UBT7 734 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 R3HDM2Q9Y2K5 976 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 TUBGCP6Q96RT7 1819 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 TMEM191CA6NGB0 347 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 KPNA7A9QM74 516 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 H0Y3Z8 333 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 CHUKO15111 745 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 ATP5HO75947 161 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 EPHB2P29323 1055 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 CHKAP35790 457 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 MAP3K7CLP57077 242 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 ARHGEF6Q15052 776 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 NOL9Q5SY16 702 aaKnown RBP13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 SLC39A4Q6P5W5 647 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 GPR142Q7Z601 462 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 SLC2A14Q8TDB8 520 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 TSSK1BQ9BXA7 367 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 RRAGCQ9HB90 399 aa13.73□□□□□ -0.21
PPP4R3B-206ENST00000616407 THP07101 528 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 CPB1P15086 417 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 HIRAP54198 1017 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 FSTL1Q12841 308 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 LRRC38Q5VT99 294 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 ZNF572Q7Z3I7 529 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 C12orf29Q8N999 325 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 ART4Q93070 314 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 ERP27Q96DN0 273 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 PAFAH2Q99487 392 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 RBPJLQ9UBG7 517 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 PRDM4Q9UKN5 801 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 STXBP5LQ9Y2K9 1186 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 USH1CQ9Y6N9 552 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 LIASO43766 372 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 CSPG5O95196 566 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 SETSIPP0DME0 302 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 TTC27Q6P3X3 843 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 RYBPQ8N488 228 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 JOSD2Q8TAC2 188 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 FIZ1Q96SL8 496 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 MARCOQ9UEW3 520 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 DDX20Q9UHI6 824 aaKnown RBP13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 B4GALT4O60513 344 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 KCNA3P22001 575 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 CYP2F1P24903 491 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 PSEN2P49810 448 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 MDH1BQ5I0G3 518 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 PLEKHA7Q6IQ23 1121 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 DENND5BQ6ZUT9 1274 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 NDUFAF2Q8N183 169 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 DONSONQ9NYP3 566 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 MID2Q9UJV3 735 aa13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 DDX60Q8IY21 1712 aaKnown RBP13.72□□□□□ -0.21
PPP4R3B-206ENST00000616407 GPR25O00155 361 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 PTPN20Q4JDL3 420 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 SPDYCQ5MJ68 293 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 GLB1LQ6UWU2 654 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 MON1BQ7L1V2 547 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 PARP9Q8IXQ6 854 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 HASPINQ8TF76 798 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 FRMD8Q9BZ67 464 aaPredicted RBP13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 ZNF112Q9UJU3 913 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 APOBEC2Q9Y235 224 aaKnown RBP13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 PRG3Q9Y2Y8 225 aaPredicted RBP13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 MYH8P13535 1937 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 TXNDC9O14530 226 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 CCDC130P13994 396 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 SLC6A3Q01959 620 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 AUHQ13825 339 aaKnown RBP13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 TSHZ1Q6ZSZ6 1077 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 MICAL1Q8TDZ2 1067 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 FBXL18Q96ME1 805 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 FAM111AQ96PZ2 611 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 CFAP73A6NFT4 308 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 CASTOR2A6NHX0 329 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 TADA2AO75478 443 aa13.71□□□□□ -0.21
PPP4R3B-206ENST00000616407 ELK3P41970 407 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms