RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 NIPA2Q8N8Q9 360 aa14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 NKD2Q969F2 451 aaPredicted RBP14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 MAGEB18Q96M61 343 aa14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 PEBP4Q96S96 227 aa14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 BCO2Q9BYV7 579 aa14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 ECT2Q9H8V3 914 aa14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 NGRNQ9NPE2 291 aaKnown RBP14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 PRMT7Q9NVM4 692 aaPredicted RBP14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 SCN1AP35498 2009 aa14.53□□□□□ -0.08
CACNA1C-231ENST00000616390 CITO14578 2027 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 H7C0C1 242 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 AVILO75366 819 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 GHRP10912 638 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 KRT4P19013 534 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 OSBPP22059 807 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 GPD2P43304 727 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 ATP5OP48047 213 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 SNCBQ16143 134 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 GLRA4Q5JXX5 417 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 FAXCQ5TGI0 409 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 PPP1R21Q6ZMI0 780 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 ILDR2Q71H61 639 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 SUGP1Q8IWZ8 645 aaKnown RBP14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 FBF1Q8TES7 1133 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 RXFP2Q8WXD0 754 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 CDCA5Q96FF9 252 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 KIF12Q96FN5 646 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 TTC25Q96NG3 672 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 LHX5Q9H2C1 402 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 TSPAN16Q9UKR8 245 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 GRID1Q9ULK0 1009 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 HES2Q9Y543 173 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 LOC285556D6RIA3 1793 aa14.52□□□□□ -0.08
CACNA1C-231ENST00000616390 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 ALOX15BO15296 676 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 TMEM63AO94886 807 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 TRUB2O95900 331 aaKnown RBP14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 SLC1A5Q15758 541 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 NAIF1Q69YI7 327 aaPredicted RBP14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 SCUBE3Q8IX30 993 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 PPIL6Q8IXY8 311 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 SGIP1Q9BQI5 828 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 APOL6Q9BWW8 343 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 MIS12Q9H081 205 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 DPP3Q9NY33 737 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 EURLQ9NYK6 297 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 KLHL14Q9P2G3 628 aa14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 MYO18AQ92614 2054 aaKnown RBP14.52□□□□□ -0.09
CACNA1C-231ENST00000616390 DNAJC25-GNG10A0A024R161 153 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 MCF2LO15068 1137 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 CYP3A5P20815 502 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ARL4CP56559 192 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 KIZQ2M2Z5 673 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 MAMSTRQ6ZN01 415 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 FAM183BPQ6ZVS7 135 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 BBS12Q6ZW61 710 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ACOT1Q86TX2 421 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 C7orf31Q8N865 590 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 FAM49AQ9H0Q0 323 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ARL2BPQ9Y2Y0 163 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 CLUHO75153 1309 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 HCRTO43612 131 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 DNAJC8O75937 253 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 RDXP35241 583 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ELF3P78545 371 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 MGAT5Q09328 741 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 KRT81Q14533 505 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ZNF268Q14587 947 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 SEPT7Q16181 437 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 PPP6R3Q5H9R7 873 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 HHATQ5VTY9 493 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 AP1ARQ63HQ0 302 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 TRNP1Q6NT89 227 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 POLNQ7Z5Q5 900 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 RELL1Q8IUW5 271 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 P3H4Q92791 437 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ACAP3Q96P50 834 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 SLC12A4Q9UP95 1085 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 SHOC2Q9UQ13 582 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 SNX9Q9Y5X1 595 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 RBM47A0AV96 593 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 SPDYE5A6NIY4 337 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 CXCL11O14625 94 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 PPEF2O14830 753 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 OAS1P00973 400 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ABHD2P08910 425 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ARHGAP1Q07960 439 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 XRCC4Q13426 336 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 LVRNQ6Q4G3 990 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 CEP128Q6ZU80 1094 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 B3GNT5Q9BYG0 378 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 ASNSD1Q9NWL6 643 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 PHTF1Q9UMS5 762 aa14.51□□□□□ -0.09
CACNA1C-231ENST00000616390 F5H423 210 aaPredicted RBP14.5□□□□□ -0.09
CACNA1C-231ENST00000616390 GEMIN4P57678 1058 aaKnown RBP14.5□□□□□ -0.09
CACNA1C-231ENST00000616390 PPP1R26Q5T8A7 1209 aaPredicted RBP14.5□□□□□ -0.09
CACNA1C-231ENST00000616390 FAM228AQ86W67 206 aa14.5□□□□□ -0.09
CACNA1C-231ENST00000616390 KLHL29Q96CT2 875 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms