RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 DARSP14868 501 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 COILP38432 576 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 ANKS3Q6ZW76 656 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC25A41Q8N5S1 370 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 CCNYL1Q8N7R7 359 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 CFAP61Q8NHU2 1237 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 MAML1Q92585 1016 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 APBB2Q92870 758 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 UBXN6Q9BZV1 441 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 ATXN3LQ9H3M9 355 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 FAM105AQ9NUU6 356 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 GTSE1Q9NYZ3 720 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 ASTN1O14525 1302 aa9.82□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF263O14978 683 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 HIST1H2AGP0C0S8 130 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 HIST1H2ADP20671 130 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 GEMIN4P57678 1058 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 IMPG1Q17R60 797 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 FASTKD1Q53R41 847 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 TMTC4Q5T4D3 741 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 THEMIS2Q5TEJ8 643 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PPIL6Q8IXY8 311 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 FAM71DQ8N9W8 422 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 EXD1Q8NHP7 514 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 C7orf43Q8WVR3 580 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 BTBD6Q96KE9 485 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 HIST1H2AHQ96KK5 128 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 HIST1H2AJQ99878 128 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 H2AFJQ9BTM1 129 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 TRIM55Q9BYV6 548 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 ARHGAP20Q9P2F6 1191 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 AFF4Q9UHB7 1163 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 CDH9Q9ULB4 789 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 AAR2Q9Y312 384 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 INHAP05111 366 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 BRAFP15056 766 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PTPN1P18031 435 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 CTNNB1P35222 781 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PRKCZQ05513 592 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 CBWD6Q4V339 395 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 CBWD3Q5JTY5 395 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 CBWD5Q5RIA9 395 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PHLDB3Q6NSJ2 640 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 DCLRE1AQ6PJP8 1040 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 ACAD11Q709F0 780 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 ACSF2Q96CM8 615 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 SUDS3Q9H7L9 328 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 VPS28Q9UK41 221 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 DERAQ9Y315 318 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 HES2Q9Y543 173 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PCDHA2Q9Y5H9 948 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 C10orf71Q711Q0 1435 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 NCAM2O15394 837 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PYGLP06737 847 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 SMPD1P17405 629 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 NCF2P19878 526 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 MAP4P27816 1152 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PDAP1Q13442 181 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 NUGGCQ68CJ6 796 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 C11orf63Q6NUN7 778 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 FOXR2Q6PJQ5 311 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF467Q7Z7K2 595 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 EMC1Q8N766 993 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 C4orf32Q8N8J7 132 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 SDCCAG3Q96C92 435 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PITPNM3Q9BZ71 974 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 DCLK3Q9C098 648 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 RBM12Q9NTZ6 932 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 COL20A1Q9P218 1284 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 VPS9D1Q9Y2B5 631 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 SETD1AO15047 1707 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 ADRB2P07550 413 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PPP3CAQ08209 521 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 USP41Q3LFD5 358 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 PREPLQ4J6C6 727 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 CCDC38Q502W7 563 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 WSCD1Q658N2 575 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 RNF135Q8IUD6 432 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 LRRC43Q8N309 656 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 TBC1D19Q8N5T2 526 aa9.81□□□□□ -0.84
CLTCL1-208ENST00000615606 SPEF2Q9C093 1822 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 STX7O15400 261 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 TADA3O75528 432 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 MAGOHP61326 146 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 PTK6Q13882 451 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 COBLL1Q53SF7 1204 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 KCNT1Q5JUK3 1230 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 LRRC52Q8N7C0 313 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 MTMR8Q96EF0 704 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 FAM118BQ9BPY3 351 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ERP44Q9BS26 406 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 GPATCH2LQ9NWQ4 482 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF212Q9UDV6 495 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 DOLKQ9UPQ8 538 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 CCDC85CA6NKD9 419 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ESRRBO95718 433 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ARF4P18085 180 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 BDNFP23560 247 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms