RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 FAM110CQ1W6H9 321 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 FOXB2Q5VYV0 432 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 STMN4Q9H169 189 aaPredicted RBP17.27■□□□□ 0.35
CNOT3-208ENST00000613073 IP6K2Q9UHH9 426 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 CYTH4Q9UIA0 394 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 CBX6O95503 412 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 LSM8O95777 96 aaKnown RBP17.26■□□□□ 0.35
CNOT3-208ENST00000613073 PYGBP11216 843 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 BRAFP15056 766 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 VPS41P49754 854 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 CUL3Q13618 768 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 PRKAG3Q9UGI9 489 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 PASKQ96RG2 1323 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 UNCXA6NJT0 531 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 PSTPIP1O43586 416 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 KRT10P13645 584 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 DRG2P55039 364 aaKnown RBP17.26■□□□□ 0.35
CNOT3-208ENST00000613073 TMEM132DQ14C87 1099 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 PTPN20Q4JDL3 420 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 TXNRD3NBQ6F5E7 133 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 C12orf50Q8NA57 414 aaPredicted RBP17.26■□□□□ 0.35
CNOT3-208ENST00000613073 SPOCK2Q92563 424 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 CDHR5Q9HBB8 845 aa17.26■□□□□ 0.35
CNOT3-208ENST00000613073 EIF4BP23588 611 aaKnown RBP17.25■□□□□ 0.35
CNOT3-208ENST00000613073 SPDYCQ5MJ68 293 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 IFNLR1Q8IU57 520 aaPredicted RBP17.25■□□□□ 0.35
CNOT3-208ENST00000613073 CCNJLQ8IV13 435 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 CXorf38Q8TB03 319 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 CKAP2Q8WWK9 683 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 HPDLQ96IR7 371 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 ACAP3Q96P50 834 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 BCO2Q9BYV7 579 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 OSBPL8Q9BZF1 889 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 UBE2OQ9C0C9 1292 aaKnown RBP17.25■□□□□ 0.35
CNOT3-208ENST00000613073 TXLNGQ9NUQ3 528 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 ASIC3Q9UHC3 531 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 COL1A2P08123 1366 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 APBB1IPQ7Z5R6 666 aaPredicted RBP17.25■□□□□ 0.35
CNOT3-208ENST00000613073 SLC4A11Q8NBS3 891 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 TBC1D10AQ9BXI6 508 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 DCLK3Q9C098 648 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 ELOVL4Q9GZR5 314 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 OCEL1Q9H607 264 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 NMRK1Q9NWW6 199 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 PCDHGC3Q9UN70 934 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 HES2Q9Y543 173 aa17.25■□□□□ 0.35
CNOT3-208ENST00000613073 TCRBV5S1A1TA0A578 114 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 WFS1O76024 890 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 ATF7P17544 494 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-208ENST00000613073 YWHAEP62258 255 aaKnown RBP17.24■□□□□ 0.35
CNOT3-208ENST00000613073 CCDC6Q16204 474 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 IQSEC1Q6DN90 963 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 PPP1R2P3Q6NXS1 205 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 PRUNE1Q86TP1 453 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 ZC3H18Q86VM9 953 aaKnown RBP17.24■□□□□ 0.35
CNOT3-208ENST00000613073 SRRM1Q8IYB3 904 aaKnown RBP17.24■□□□□ 0.35
CNOT3-208ENST00000613073 KATNAL2Q8IYT4 538 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 KIF12Q96FN5 646 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 ADPGKQ9BRR6 497 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 PITPNM3Q9BZ71 974 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 CDC42EP4Q9H3Q1 356 aaKnown RBP17.24■□□□□ 0.35
CNOT3-208ENST00000613073 ASB7Q9H672 318 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 DENND2DQ9H6A0 471 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-208ENST00000613073 ITGBL1O95965 494 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-208ENST00000613073 RFC1P35251 1148 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-208ENST00000613073 FKBP1BP68106 108 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 TRIM74Q86UV6 250 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 TRIM73Q86UV7 250 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 ZNF518BQ9C0D4 1074 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 SYNCQ9H7C4 482 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 DPP3Q9NY33 737 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 FLRT1Q9NZU1 646 aa17.24■□□□□ 0.35
CNOT3-208ENST00000613073 PIK3R2O00459 728 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 SERPINB4P48594 390 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 KLF1Q13351 362 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 LBRQ14739 615 aaKnown RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 SETDB1Q15047 1291 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 LRRC23Q53EV4 343 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 CST9Q5W186 159 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 CPXM1Q96SM3 734 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 OSMRQ99650 979 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 DDX50Q9BQ39 737 aaKnown RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 VCXQ9H320 206 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 TRIP11Q15643 1979 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 KRT1P04264 644 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 HUNKP57058 714 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 PSMC1P62191 440 aaKnown RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 NFX1Q12986 1120 aaKnown RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 CALCOCO2Q13137 446 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 DNAJC3Q13217 504 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 OR52E8Q6IFG1 317 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 CYP4X1Q8N118 509 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 EMC1Q8N766 993 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 EXD1Q8NHP7 514 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 JOSD2Q8TAC2 188 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 UBA3Q8TBC4 463 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 RUNDC3BQ96NL0 473 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms