RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 DENND5BQ6ZUT9 1274 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 GLIS3Q8NEA6 775 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 MAGEC2Q9UBF1 373 aaPredicted RBP25.04■■□□□ 1.6
MMP28-203ENST00000612672 SEL1LQ9UBV2 794 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 KLK13Q9UKR3 277 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 CLIC4Q9Y696 253 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 NEFLP07196 543 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 PDGFRBP09619 1106 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 TMEM191BP0C7N4 346 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 ENGP17813 658 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 GRIK1P39086 918 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 MRPS21P82921 87 aaKnown RBP25.03■■□□□ 1.6
MMP28-203ENST00000612672 C4orf50Q6ZRC1 276 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 PHTF2Q8N3S3 785 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 PCED1BQ96HM7 432 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 CLIC6Q96NY7 704 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 INTS13Q9NVM9 706 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 TRPM5Q9NZQ8 1165 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 FBXO2Q9UK22 296 aaPredicted RBP25.03■■□□□ 1.6
MMP28-203ENST00000612672 CDH9Q9ULB4 789 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 CIZ1Q9ULV3 898 aaPredicted RBP25.03■■□□□ 1.6
MMP28-203ENST00000612672 EXOC7Q9UPT5 735 aa25.03■■□□□ 1.6
MMP28-203ENST00000612672 SPAARA0A1B0GVQ0 90 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 FRMD3A2A2Y4 597 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 F8VP50 259 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 PRPF6O94906 941 aaKnown RBP25.02■■□□□ 1.6
MMP28-203ENST00000612672 KAT7O95251 611 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 OAS1P00973 400 aaKnown RBP25.02■■□□□ 1.6
MMP28-203ENST00000612672 CYP27A1Q02318 531 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 VSTM1Q6UX27 236 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 HPDLQ96IR7 371 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 MRPL45Q9BRJ2 306 aaKnown RBP25.02■■□□□ 1.6
MMP28-203ENST00000612672 OLFML3Q9NRN5 406 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 STK17AQ9UEE5 414 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 HCN2Q9UL51 889 aa25.02■■□□□ 1.6
MMP28-203ENST00000612672 A0A087X0B3 334 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 TNFRSF10BO14763 440 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 BMP15O95972 392 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 LDHAP00338 332 aaKnown RBP25.01■■□□□ 1.59
MMP28-203ENST00000612672 GAP43P17677 238 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 WARSP23381 471 aaKnown RBP25.01■■□□□ 1.59
MMP28-203ENST00000612672 FAM193AP78312 1265 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 RABEP1Q15276 862 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 MDH1BQ5I0G3 518 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 LPCAT2Q7L5N7 544 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 PIP4P1Q86T03 277 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 CBWD2Q8IUF1 395 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 CCDC26Q8TAB7 109 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 HMGB4Q8WW32 186 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 ZCCHC14Q8WYQ9 949 aaKnown RBP25.01■■□□□ 1.59
MMP28-203ENST00000612672 ZFRQ96KR1 1074 aaKnown RBP25.01■■□□□ 1.59
MMP28-203ENST00000612672 PNKPQ96T60 521 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 CFAP97Q9P2B7 532 aa25.01■■□□□ 1.59
MMP28-203ENST00000612672 ITPKAP23677 461 aa25■■□□□ 1.59
MMP28-203ENST00000612672 RESTQ13127 1097 aa25■■□□□ 1.59
MMP28-203ENST00000612672 PEAR1Q5VY43 1037 aaPredicted RBP25■■□□□ 1.59
MMP28-203ENST00000612672 SYT12Q8IV01 421 aa25■■□□□ 1.59
MMP28-203ENST00000612672 WHAMMQ8TF30 809 aa25■■□□□ 1.59
MMP28-203ENST00000612672 WBP2Q969T9 261 aa25■■□□□ 1.59
MMP28-203ENST00000612672 DPEP3Q9H4B8 488 aa25■■□□□ 1.59
MMP28-203ENST00000612672 PILRBQ9UKJ0 227 aa25■■□□□ 1.59
MMP28-203ENST00000612672 TCRBV21S2A2A0A5A6 115 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 TMEM8BA6NDV4 472 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 PFKLP17858 780 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 NOP14P78316 857 aaKnown RBP24.99■■□□□ 1.59
MMP28-203ENST00000612672 TAF10Q12962 218 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 LARP1BQ659C4 914 aaKnown RBP24.99■■□□□ 1.59
MMP28-203ENST00000612672 DPH6Q7L8W6 267 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 BRAPQ7Z569 592 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 SYCP3Q8IZU3 236 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 GPD1LQ8N335 351 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 DEFB119Q8N690 84 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 MYCBPAPQ8TBZ2 947 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 HPS3Q969F9 1004 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 ANKRD36BP1Q96IX9 119 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 ARHGEF4Q9NR80 690 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 SMC3Q9UQE7 1217 aa24.99■■□□□ 1.59
MMP28-203ENST00000612672 A0A0A0MRY4 1105 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 ALDH1A2O94788 518 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 APODP05090 189 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 ADH5P11766 374 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 IDEP14735 1019 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 HOXD13P35453 343 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 PDE6CP51160 858 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 LMAN2Q12907 356 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 SEMA3BQ13214 749 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 SLC23A3Q6PIS1 610 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 OR2I1PQ8NGU4 316 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 C8orf48Q96LL4 319 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 NUSAP1Q9BXS6 441 aaKnown RBP24.98■■□□□ 1.59
MMP28-203ENST00000612672 ZNF518BQ9C0D4 1074 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 BCCIPQ9P287 314 aaKnown RBP eCLIP24.98■■□□□ 1.59
MMP28-203ENST00000612672 NEUROG3Q9Y4Z2 214 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 PCDHB13Q9Y5F0 798 aa24.98■■□□□ 1.59
MMP28-203ENST00000612672 CLDN5O00501 218 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 TRIM24O15164 1050 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 ABL1P00519 1130 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 ANXA13P27216 316 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 EIF2DP41214 584 aaKnown RBP24.97■■□□□ 1.59
MMP28-203ENST00000612672 RING1Q06587 406 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms