RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
CCDC47-207ENST00000612558 KIAA0100Q14667 2235 aaKnown RBP9.38□□□□□ -0.91
CCDC47-207ENST00000612558 TTC3P53804 2025 aa9.38□□□□□ -0.91
CCDC47-207ENST00000612558 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 E5RJQ4 531 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 ATP2C2O75185 946 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 CYP11A1P05108 521 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 JUNDP17535 347 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 PSMA2P25787 234 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 PCSK1P29120 753 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 SSR1P43307 286 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 ACADSBP45954 432 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 GJA8P48165 433 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 RPL34P49207 117 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 RGS7P49802 495 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 SLC8A3P57103 927 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 SKOR1P84550 965 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 OGDHQ02218 1023 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 RNASELQ05823 741 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 ZNF252P-AS1Q0IIN9 211 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 ACAP1Q15027 740 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 BRD3Q15059 726 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 PPP2R5EQ16537 467 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 TRIM60Q495X7 471 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 OR6B2Q6IFH4 312 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 C8orf74Q6P047 294 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 CC2D1AQ6P1N0 951 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 WDR93Q6P2C0 686 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 FBXO38Q6PIJ6 1188 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 ZNF280BQ86YH2 543 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 COLGALT2Q8IYK4 626 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 ABI1Q8IZP0 508 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 JOSD2Q8TAC2 188 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 RSPH1Q8WYR4 309 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 RUBCNQ92622 972 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 SUSD3Q96L08 255 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 HSFY1Q96LI6 401 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 FAM193BQ96PV7 902 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 PNKPQ96T60 521 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 ACBD6Q9BR61 282 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 AP1M1Q9BXS5 423 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 DUSP16Q9BY84 665 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 METTL5Q9NRN9 209 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 TBC1D13Q9NVG8 400 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 TIMM13Q9Y5L4 95 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 CCDC151A5D8V7 595 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 F8VP50 259 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 TMEM189-UBE2V1I3L0A0 370 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 TULP2O00295 520 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 XPO1O14980 1071 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 HOXA2O43364 376 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 DDHD2O94830 711 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 HSPA8P11142 646 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 TYMPP19971 482 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 BRCC3P46736 316 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 CCL23P55773 120 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 TAS2R40P59535 323 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 RBM10P98175 930 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 SLC6A3Q01959 620 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 PLCB3Q01970 1234 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 PAN2Q504Q3 1202 aaKnown RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 MDH1BQ5I0G3 518 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 FAM102AQ5T9C2 384 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-207ENST00000612558 FAM183BPQ6ZVS7 135 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 KATNAL2Q8IYT4 538 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 FUKQ8N0W3 1084 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 THEM5Q8N1Q8 247 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 EXD1Q8NHP7 514 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 SCLYQ96I15 445 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 KRT12Q99456 494 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 SYT15Q9BQS2 421 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 MED10Q9BTT4 135 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 SLITRK6Q9H5Y7 841 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 CRTAC1Q9NQ79 661 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
CCDC47-207ENST00000612558 PIK3R2O00459 728 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 FSCN2O14926 492 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 PAPSS1O43252 624 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 SART1O43290 800 aaKnown RBP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 ZRANB2O95218 330 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 NPR3P17342 541 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 CAPN2P17655 700 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 TKTP29401 623 aaKnown RBP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 CYP2C18P33260 490 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 SCNN1AP37088 669 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 CETN2P41208 172 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 ZNF143P52747 638 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 SCN5AQ14524 2016 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 HADHQ16836 314 aaKnown RBP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 KIAA0319Q5VV43 1072 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 DAB2IPQ5VWQ8 1189 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 AADACL2Q6P093 401 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 OLFML1Q6UWY5 402 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 PAQR9Q6ZVX9 377 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 ARCQ7LC44 396 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 MTERF4Q7Z6M4 381 aaKnown RBP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 SLC13A5Q86YT5 568 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms