RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 DNAJB3Q8WWF6 145 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 PRCCQ92733 491 aaPredicted RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 FETUBQ9UGM5 382 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 SLC24A2Q9UI40 661 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 MBLAC1A4D2B0 266 aaPredicted RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 TSPAN1O60635 241 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 KRT7P08729 469 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 STAG3L1P0CL83 205 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 CXCL8P10145 99 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 MCF2P10911 925 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 ETS1P14921 441 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 SLC8A1P32418 973 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 CCDC15Q0P6D6 951 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 SF3A3Q12874 501 aaKnown RBP eCLIP15.4■□□□□ 0.06
CDH1-213ENST00000612417 HIC1Q14526 733 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 FASTKD3Q14CZ7 662 aaKnown RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 PREPLQ4J6C6 727 aaPredicted RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 ZNF394Q53GI3 561 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 TMEM192Q8IY95 271 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 TACO1Q9BSH4 297 aaKnown RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 ADAMTS10Q9H324 1103 aa15.4■□□□□ 0.06
CDH1-213ENST00000612417 SMG5Q9UPR3 1016 aaKnown RBP15.4■□□□□ 0.06
CDH1-213ENST00000612417 ATP6V1G2O95670 118 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 TNNC2P02585 160 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 WEE2P0C1S8 567 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 RARBP10826 455 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 GNAT1P11488 350 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 ELNP15502 786 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 FOXN2P32314 431 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 CACNB2Q08289 660 aaPredicted RBP15.39■□□□□ 0.05
CDH1-213ENST00000612417 ZNF268Q14587 947 aaPredicted RBP15.39■□□□□ 0.05
CDH1-213ENST00000612417 PTPN20Q4JDL3 420 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 CYP4A22Q5TCH4 519 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 BBS12Q6ZW61 710 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 CATSPER4Q7RTX7 472 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 TTC13Q8NBP0 860 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 OSMRQ99650 979 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 ADPGKQ9BRR6 497 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 TMEM121Q9BTD3 319 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 BCO2Q9BYV7 579 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 CDHR5Q9HBB8 845 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 RNF186Q9NXI6 227 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.39■□□□□ 0.05
CDH1-213ENST00000612417 MED7O43513 233 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 KPNA6O60684 536 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 GPR32O75388 356 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 LRCH4O75427 683 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 IL18RAPO95256 599 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 RFC1P35251 1148 aaPredicted RBP15.39■□□□□ 0.05
CDH1-213ENST00000612417 SKIV2L2P42285 1042 aaKnown RBP15.39■□□□□ 0.05
CDH1-213ENST00000612417 GJA9P57773 515 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 CAP1Q01518 475 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 ZKSCAN8Q15776 578 aaPredicted RBP15.39■□□□□ 0.05
CDH1-213ENST00000612417 ANKRD36BP1Q96IX9 119 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 MTG1Q9BT17 334 aaPredicted RBP15.39■□□□□ 0.05
CDH1-213ENST00000612417 TRABDQ9H4I3 376 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 KLHL14Q9P2G3 628 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 WDR35Q9P2L0 1181 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 STARD13Q9Y3M8 1113 aa15.39■□□□□ 0.05
CDH1-213ENST00000612417 CITO14578 2027 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 SGK1O00141 431 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 SEPT4O43236 478 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 KRT3P12035 628 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 NQO1P15559 274 aaKnown RBP15.38■□□□□ 0.05
CDH1-213ENST00000612417 PSMA2P25787 234 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 APLP1P51693 650 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 HIF1AQ16665 826 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 EFHC2Q5JST6 749 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 DENND1BQ6P3S1 775 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 CXCL17Q6UXB2 119 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 ZBED8Q8IZ13 594 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 FITM2Q8N6M3 262 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 ARFGAP1Q8N6T3 406 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 ECT2Q9H8V3 914 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 SSU72Q9NP77 194 aaKnown RBP15.38■□□□□ 0.05
CDH1-213ENST00000612417 CASP8AP2Q9UKL3 1982 aa15.38■□□□□ 0.05
CDH1-213ENST00000612417 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 LACTBL1A8MY62 500 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 SMAPO00193 183 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 SPARCL1Q14515 664 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 HADHQ16836 314 aaKnown RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 ZC3H12AQ5D1E8 599 aaKnown RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 SCARA5Q6ZMJ2 495 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 PPIL6Q8IXY8 311 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 ACTL9Q8TC94 416 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 CD99L2Q8TCZ2 262 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 ACSF2Q96CM8 615 aaPredicted RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 HAUS1Q96CS2 278 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 RMDN2Q96LZ7 410 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 SMC6Q96SB8 1091 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 PITPNM3Q9BZ71 974 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 NOD2Q9HC29 1040 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 PSMC3IPQ9P2W1 217 aaPredicted RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 CYTH4Q9UIA0 394 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 POC1B-GALNT4F8VUJ3 575 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 KIF1CO43896 1103 aaKnown RBP15.37■□□□□ 0.05
CDH1-213ENST00000612417 KRT19P08727 400 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 ALADP13716 330 aa15.37■□□□□ 0.05
CDH1-213ENST00000612417 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms