RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 PCYOX1Q9UHG3 505 aa14.38□□□□□ -0.11
MUC1-223ENST00000611571 C3orf70A6NLC5 250 aaPredicted RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 EEF2KO00418 725 aaKnown RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 GJB1P08034 283 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 FDX1P10109 184 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 GFAPP14136 432 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 ZFXP17010 805 aaPredicted RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 GCNT1Q02742 428 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 MMRN1Q13201 1228 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 MAMLD1Q13495 774 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 USP13Q92995 863 aaPredicted RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 SMARCAD1Q9H4L7 1026 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 PLEKHA5Q9HAU0 1116 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 CHST12Q9NRB3 414 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 ANKRD26Q9UPS8 1709 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 ZMPSTE24O75844 475 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 NCAM1P13591 858 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 TFE3P19532 575 aaPredicted RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 ACO1P21399 889 aaKnown RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 TGM2P21980 687 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 RFC5P40937 340 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 HIRAP54198 1017 aaPredicted RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 SLC20A2Q08357 652 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 RNF168Q8IYW5 571 aaPredicted RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 KCTD17Q8N5Z5 321 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 TMEM161BQ8NDZ6 487 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 CAAP1Q9H8G2 361 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 PCDH9Q9HC56 1237 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 LZTS1Q9Y250 596 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 RBAK-RBAKDNI3L0D1 243 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 FASTKD3Q14CZ7 662 aaKnown RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 APPL2Q8NEU8 664 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 CMTM5Q96DZ9 223 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 PTPRHQ9HD43 1115 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 C3P01024 1663 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 DDX3YO15523 660 aaKnown RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 RBL1P28749 1068 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 SPRP35270 261 aaPredicted RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 GNL1P36915 607 aaPredicted RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 NAMPTP43490 491 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 BACE1P56817 501 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 FLOT2Q14254 428 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 ANGPTL8Q6UXH0 198 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 YTHDF3Q7Z739 585 aaKnown RBP14.37□□□□□ -0.11
MUC1-223ENST00000611571 BBS5Q8N3I7 341 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 ELMO2Q96JJ3 720 aa14.37□□□□□ -0.11
MUC1-223ENST00000611571 PEX10O60683 326 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 HNRNPCL1O60812 293 aaKnown RBP14.36□□□□□ -0.11
MUC1-223ENST00000611571 EEF1DP29692 281 aaKnown RBP14.36□□□□□ -0.11
MUC1-223ENST00000611571 TNFSF9P41273 254 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 MMP13P45452 471 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 SNRPFP62306 86 aaKnown RBP14.36□□□□□ -0.11
MUC1-223ENST00000611571 MTFR1Q15390 333 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 DEFB107AQ8IZN7 70 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 AFG1LQ8WV93 481 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 TNIP3Q96KP6 325 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 DDIT4Q9NX09 232 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 SLC12A6Q9UHW9 1150 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 VAV3Q9UKW4 847 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 SHOX2O60902 331 aaPredicted RBP14.36□□□□□ -0.11
MUC1-223ENST00000611571 HNRNPCP07910 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
MUC1-223ENST00000611571 PAMP19021 973 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 TM4SF1P30408 202 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
MUC1-223ENST00000611571 PTK6Q13882 451 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 PREPLQ4J6C6 727 aaPredicted RBP14.36□□□□□ -0.11
MUC1-223ENST00000611571 C6orf10Q5SRN2 563 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 MAP4K3Q8IVH8 894 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 SCG3Q8WXD2 468 aaKnown RBP14.36□□□□□ -0.11
MUC1-223ENST00000611571 KCNK16Q96T55 309 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 HACD3Q9P035 362 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 SLC24A2Q9UI40 661 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 TIMM13Q9Y5L4 95 aaPredicted RBP14.36□□□□□ -0.11
MUC1-223ENST00000611571 WNT10BO00744 389 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 KLHL2O95198 593 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 NUDT17P0C025 328 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 MLH1P40692 756 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 DENND1BQ6P3S1 775 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 PYDC1Q8WXC3 89 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 RMDN1Q96DB5 314 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 DPP3Q9NY33 737 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 SHOC2Q9UQ13 582 aa14.36□□□□□ -0.11
MUC1-223ENST00000611571 DNAJC8O75937 253 aaPredicted RBP14.35□□□□□ -0.11
MUC1-223ENST00000611571 FECHP22830 423 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 AMPD1P23109 780 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 SERPINB9P50453 376 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 PAPOLAP51003 745 aaKnown RBP14.35□□□□□ -0.11
MUC1-223ENST00000611571 CACNA2D1P54289 1103 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 SH3BGRP55822 239 aaPredicted RBP14.35□□□□□ -0.11
MUC1-223ENST00000611571 NCALDP61601 193 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 MYBPC2Q14324 1141 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 FITM2Q8N6M3 262 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 ART4Q93070 314 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 IFT43Q96FT9 208 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 HIC2Q96JB3 615 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 MECRQ9BV79 373 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 IDI2Q9BXS1 227 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 ATXN3LQ9H3M9 355 aa14.35□□□□□ -0.11
MUC1-223ENST00000611571 CYP3A7-CYP3A51PA0A087WV96 503 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms