RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 LMO2P25791 158 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 KIR2DL1P43626 348 aaPredicted RBP12.62□□□□□ -0.39
FDPS-220ENST00000611010 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
FDPS-220ENST00000611010 CACNA2D1P54289 1103 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 RPL10AP62906 217 aaKnown RBP12.62□□□□□ -0.39
FDPS-220ENST00000611010 FAM193AP78312 1265 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 TFAMQ00059 246 aaKnown RBP12.62□□□□□ -0.39
FDPS-220ENST00000611010 POU5F1Q01860 360 aaKnown RBP12.62□□□□□ -0.39
FDPS-220ENST00000611010 RING1Q06587 406 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 UAP1L1Q3KQV9 507 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 TRIM61Q5EBN2 209 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 EMC10Q5UCC4 262 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 LMBRD2Q68DH5 695 aaPredicted RBP12.62□□□□□ -0.39
FDPS-220ENST00000611010 FILIP1Q7Z7B0 1213 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 ADGRF2Q8IZF7 708 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 LRRC52Q8N7C0 313 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 POMGNT1Q8WZA1 660 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 FAM213AQ9BRX8 229 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 MTMR12Q9C0I1 747 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 RNF38Q9H0F5 515 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 HCN2Q9UL51 889 aa12.62□□□□□ -0.39
FDPS-220ENST00000611010 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 GOLGA8IPA6NC78 632 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 TMEM8BA6NDV4 472 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 GOLGA8JA6NMD2 632 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 TAF4O00268 1085 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 NFATC1O95644 943 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 ENGP17813 658 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 PNPLA4P41247 253 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 MAGEA11P43364 429 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 MAPK8P45983 427 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 KCNB1Q14721 858 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 MAP7D1Q3KQU3 841 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 USP39Q53GS9 565 aaKnown RBP12.61□□□□□ -0.39
FDPS-220ENST00000611010 SLFN12LQ6IEE8 588 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 FAM173BQ6P4H8 233 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 DYMQ7RTS9 669 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 NT5DC4Q86YG4 428 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 SCN4BQ8IWT1 228 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 TMEFF1Q8IYR6 380 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 TMEM86AQ8N2M4 240 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 TXNDC5Q8NBS9 432 aaKnown RBP12.61□□□□□ -0.39
FDPS-220ENST00000611010 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 FUBP3Q96I24 572 aaKnown RBP eCLIP12.61□□□□□ -0.39
FDPS-220ENST00000611010 CBWD1Q9BRT8 395 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 PDE11AQ9HCR9 933 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
FDPS-220ENST00000611010 IGSF10Q6WRI0 2623 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 HUS1O60921 280 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 KLF8O95600 359 aaPredicted RBP12.6□□□□□ -0.39
FDPS-220ENST00000611010 OAS1P00973 400 aaKnown RBP12.6□□□□□ -0.39
FDPS-220ENST00000611010 KRT18P05783 430 aaKnown RBP12.6□□□□□ -0.39
FDPS-220ENST00000611010 HDCP19113 662 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 TIE1P35590 1138 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 UBA7P41226 1012 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 MYL7Q01449 175 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 KDSRQ06136 332 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 SEMA3BQ13214 749 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 DHCR24Q15392 516 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 BRAPQ7Z569 592 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 C11orf74Q86VG3 221 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 TTC30AQ86WT1 665 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 SPATA2LQ8IUW3 424 aaPredicted RBP12.6□□□□□ -0.39
FDPS-220ENST00000611010 TOP6BLQ8N6T0 577 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 OR5B17Q8NGF7 314 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 OR2I1PQ8NGU4 316 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 HVCN1Q96D96 273 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
FDPS-220ENST00000611010 SYT15Q9BQS2 421 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 RBAKQ9NYW8 714 aaPredicted RBP12.6□□□□□ -0.39
FDPS-220ENST00000611010 TBC1D7Q9P0N9 293 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 PILRBQ9UKJ0 227 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 ITGA11Q9UKX5 1188 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 NEUROG3Q9Y4Z2 214 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 CPQQ9Y646 472 aa12.6□□□□□ -0.39
FDPS-220ENST00000611010 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
FDPS-220ENST00000611010 MYMKA6NI61 221 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 TNFRSF10BO14763 440 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 BDNFP23560 247 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 ITPKAP23677 461 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 SLC7A9P82251 487 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 MRPS21P82921 87 aaKnown RBP12.59□□□□□ -0.39
FDPS-220ENST00000611010 SLC23A3Q6PIS1 610 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 RHBDF2Q6PJF5 856 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 MIB1Q86YT6 1006 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 ADGRG2Q8IZP9 1017 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 CSGALNACT2Q8N6G5 542 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 GLIS3Q8NEA6 775 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 SPATA18Q8TC71 538 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 WBP2Q969T9 261 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 PCED1BQ96HM7 432 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 SPATA17Q96L03 361 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 CD248Q9HCU0 757 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 CD93Q9NPY3 652 aa12.59□□□□□ -0.39
FDPS-220ENST00000611010 SMPD4Q9NXE4 827 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms