RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 DENND5BQ6ZUT9 1274 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 ARL8AQ96BM9 186 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 KREMEN1Q96MU8 473 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 YME1L1Q96TA2 773 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 NXF3Q9H4D5 531 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 MOSPD1Q9UJG1 213 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF536O15090 1300 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 TMEM120BA0PK00 339 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 E5RI56 91 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 F9P00740 461 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 TAC1P20366 129 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 BDNFP23560 247 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 MIPP30301 263 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 HNRNPH3P31942 346 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 PLA2G4AP47712 749 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 MARCKSL1P49006 195 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 OCRLQ01968 901 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 RAD51Q06609 339 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 TWF1Q12792 350 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 PTK7Q13308 1070 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 SNX17Q15036 470 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 CCNG2Q16589 344 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 C15orf59Q2T9L4 293 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 TSNAXIP1Q2TAA8 658 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 NBPF20Q3BBV1 942 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF280DQ6N043 979 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 ANKRD23Q86SG2 305 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 TMEM139Q8IV31 216 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 DEFB106AQ8N104 65 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 C12orf29Q8N999 325 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 MBOAT7Q96N66 472 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 SENP6Q9GZR1 1112 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 C10orf88Q9H8K7 445 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 TXNRD2Q9NNW7 524 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 ARHGAP28Q9P2N2 729 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 PSMC3IPQ9P2W1 217 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 ST3GAL5Q9UNP4 418 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 PCDHA3Q9Y5H8 950 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 TREHO43280 583 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 DIAPH2O60879 1101 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 CST3P01034 146 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 JCHAINP01591 159 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 HMGCRP04035 888 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 CYBBP04839 570 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 CD52P31358 61 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 MARSP56192 900 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 SPIRE1Q08AE8 756 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 PDK2Q15119 407 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 ANO4Q32M45 955 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 HABP4Q5JVS0 413 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 MROH9Q5TGP6 573 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 LRIG3Q6UXM1 1119 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 NT5DC4Q86YG4 428 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 C3orf20Q8ND61 904 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 CDC26Q8NHZ8 85 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 EPS8L3Q8TE67 593 aaKnown RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 MFSD14AQ96MC6 490 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 SEMA4AQ9H3S1 761 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 AVENQ9NQS1 362 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 PCMTD2Q9NV79 361 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 SAE1Q9UBE0 346 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 C5P01031 1676 aa7.57□□□□□ -1.2
CSDE1-218ENST00000610726 CICQ96RK0 1608 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-218ENST00000610726 SPEF2Q9C093 1822 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 SLC12A8A0AV02 714 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 NOL4O94818 638 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 ASS1P00966 412 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CKMP06732 381 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 RAG1P15918 1043 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 RAB27AP51159 221 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 RPL7AP62424 266 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 E2F5Q15329 346 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 SH2D4BQ5SQS7 431 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 TTC30AQ86WT1 665 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 DAW1Q8N136 415 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 BRI3BPQ8WY22 251 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 PTPRN2Q92932 1015 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CELF6Q96J87 481 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 MAML3Q96JK9 1138 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 TEPSINQ96N21 525 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FOXP3Q9BZS1 431 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 GOLGA2P5Q9HBQ8 144 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CHST7Q9NS84 486 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 UBP1Q9NZI7 540 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 SENP1Q9P0U3 644 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 SH3BP1Q9Y3L3 701 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 ENDOD1O94919 500 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 MMP3P08254 477 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 ICAM3P32942 547 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CCL23P55773 120 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 FOXR2Q6PJQ5 311 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 TMC7Q7Z402 723 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 C12orf56Q8IXR9 622 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 PPHLN1Q8NEY8 458 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 CDC42EP4Q9H3Q1 356 aaKnown RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 C20orf96Q9NUD7 363 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 MARCOQ9UEW3 520 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-218ENST00000610726 DSEQ9UL01 958 aa7.56□□□□□ -1.2
CSDE1-218ENST00000610726 APOBEC2Q9Y235 224 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms