RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 HSFY1Q96LI6 401 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 DDX23Q9BUQ8 820 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 SNX25Q9H3E2 840 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 CCDC134Q9H6E4 229 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 PCSK1NQ9UHG2 260 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 ACTL7BQ9Y614 415 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 M0QZ92 97 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 TNPO2O14787 897 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 MDM4O15151 490 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 ALOX15BO15296 676 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 TOMM70O94826 608 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 LRPAP1P30533 357 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 PTPN9P43378 593 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 SREBF2Q12772 1141 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 NR1H3Q13133 447 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 HIC1Q14526 733 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 CCL14Q16627 93 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 SKIDA1Q1XH10 827 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 SLC26A9Q7LBE3 791 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 PPIL6Q8IXY8 311 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 HACE1Q8IYU2 909 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 ZNF473Q8WTR7 871 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 HSPH1Q92598 858 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 ACSF2Q96CM8 615 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 XPO6Q96QU8 1125 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 MTG1Q9BT17 334 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 TMEM121Q9BTD3 319 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 PPANQ9NQ55 473 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 SLC38A7Q9NVC3 462 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 HES2Q9Y543 173 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-206ENST00000609853 CFAP69A5D8W1 941 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 PPEF2O14830 753 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 HUS1O60921 280 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 TSHRP16473 764 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 TGM2P21980 687 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 AKAP5P24588 427 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 CDH6P55285 790 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 SLC8A3P57103 927 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 IFI35P80217 286 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-206ENST00000609853 RASA2Q15283 850 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 CCDC14Q49A88 953 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 TDRPQ86YL5 185 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 UHMK1Q8TAS1 419 aaKnown RBP12.5□□□□□ -0.41
USP6NL-206ENST00000609853 TMEM40Q8WWA1 233 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 CALN1Q9BXU9 219 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 PRDM16Q9HAZ2 1276 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 LRRC4CQ9HCJ2 640 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 CHST12Q9NRB3 414 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP6NL-206ENST00000609853 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-206ENST00000609853 IPPQ9Y573 584 aa12.5□□□□□ -0.41
USP6NL-206ENST00000609853 SCN10AQ9Y5Y9 1956 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 C5orf60A6NFR6 353 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 IFNB1P01574 187 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 SLC10A3P09131 477 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 CHN1P15882 459 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 PECAM1P16284 738 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 WARSP23381 471 aaKnown RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 SLCO1A2P46721 670 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 GJA9P57773 515 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 DYNLT1P63172 113 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 NKX3-2P78367 333 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 BEX3Q00994 111 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 PDE4CQ08493 712 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 CBLBQ13191 982 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 DPYSL3Q14195 570 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 KRT81Q14533 505 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 NOMO1Q15155 1222 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 LONRF1Q17RB8 773 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 C4orf22Q6V702 233 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 CYP4V2Q6ZWL3 525 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 YTHDF3Q7Z739 585 aaKnown RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 SAPCD2Q86UD0 394 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 GLIS1Q8NBF1 620 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 SPATA18Q8TC71 538 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 KBTBD7Q8WVZ9 684 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 PRCCQ92733 491 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 P3H4Q92791 437 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 ARHGEF2Q92974 986 aaKnown RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 HAUS1Q96CS2 278 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 RNF157Q96PX1 679 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 SELENOSQ9BQE4 189 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 ZNF670Q9BS34 389 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 APOL6Q9BWW8 343 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 FRMD8Q9BZ67 464 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-206ENST00000609853 CXCL16Q9H2A7 254 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 SPC25Q9HBM1 224 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 SAYSD1Q9NPB0 183 aa12.49□□□□□ -0.41
USP6NL-206ENST00000609853 FAM49BQ9NUQ9 324 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms