RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 AVPR1BP47901 424 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 ITGA8P53708 1063 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 GRM1Q13255 1194 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 STARD3Q14849 445 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 GRAMD1BQ3KR37 738 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 ICE2Q659A1 982 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 PLAG1Q6DJT9 500 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 FCRL6Q6DN72 434 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 RGS7BPQ6MZT1 257 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 KRT28Q7Z3Y7 464 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 KCTD20Q7Z5Y7 419 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 GPR149Q86SP6 731 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 SLC15A3Q8IY34 581 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 SPARTQ8N0X7 666 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 FAM109AQ8N4B1 249 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 B3GALNT2Q8NCR0 500 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 SLC30A5Q8TAD4 765 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 ASB10Q8WXI3 467 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 FAM136AQ96C01 138 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 PTCD3Q96EY7 689 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 TMEM41AQ96HV5 264 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 TPSD1Q9BZJ3 242 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 AMBRA1Q9C0C7 1298 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 CXorf36Q9H7Y0 433 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 PTPRHQ9HD43 1115 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 TBCCD1Q9NVR7 557 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 DNMT3BQ9UBC3 853 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 TESQ9UGI8 421 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 SERTAD3Q9UJW9 196 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 CAPN11Q9UMQ6 739 aa5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 MAGED2Q9UNF1 606 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 EPN1Q9Y6I3 576 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-213ENST00000609587 A0A087WV62 115 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 PLEKHD1A6NEE1 506 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 HNRNPDLO14979 420 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 PLA2G6O60733 806 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 PIAS2O75928 621 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 HKR1P10072 659 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 PPP3CBP16298 524 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 TRAPPC10P48553 1259 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 KRT72Q14CN4 511 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 EPHA10Q5JZY3 1008 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 ZNF362Q5T0B9 420 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 FAM83BQ5T0W9 1011 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 STRIP1Q5VSL9 837 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 FBXO38Q6PIJ6 1188 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 SMC5Q8IY18 1101 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 EXOC8Q8IYI6 725 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 SUPT20HQ8NEM7 779 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 SSH3Q8TE77 659 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 TTLL2Q9BWV7 592 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 ACTRT3Q9BYD9 372 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 STK33Q9BYT3 514 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 FAM83DQ9H4H8 585 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 MYH16Q9H6N6 1097 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 AS3MTQ9HBK9 375 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 DKK4Q9UBT3 224 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 SSX2IPQ9Y2D8 614 aa5.11□□□□□ -1.59
SMCHD1-213ENST00000609587 FAM234BA2RU67 622 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 PODXLO00592 558 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 MAST3O60307 1309 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 SRGAP2O75044 1071 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 TCEA3O75764 348 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 NDST3O95803 873 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 SRGNP10124 158 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 ITGAMP11215 1152 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 IDEP14735 1019 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 PDE6CP51160 858 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 COPAP53621 1224 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 SEC24CP53992 1094 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 TRIM14Q14142 442 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 KCNAB1Q14722 419 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 SF3B3Q15393 1217 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 ZNF750Q32MQ0 723 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 PTCHD3Q3KNS1 767 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 PGBD2Q6P3X8 592 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 RD3Q7Z3Z2 195 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 ZNF527Q8NB42 609 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 DNAJB14Q8TBM8 379 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 LPIN2Q92539 896 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 MUL1Q969V5 352 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 SNX27Q96L92 541 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 GDF15Q99988 308 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 POLR3GLQ9BT43 218 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 GBA2Q9HCG7 927 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 CASS4Q9NQ75 786 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 TM7SF3Q9NS93 570 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 SLC39A10Q9ULF5 831 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 COX11Q9Y6N1 276 aa5.1□□□□□ -1.59
SMCHD1-213ENST00000609587 A0A087WZ62 844 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 PPM1DO15297 605 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 FFAR2O15552 330 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 EIF5BO60841 1220 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 ESRRBO95718 433 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 CSF1RP07333 972 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 GABRB3P28472 473 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 ADORA2AP29274 412 aa5.09□□□□□ -1.59
SMCHD1-213ENST00000609587 ALDH9A1P49189 494 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms