RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 PHACTR2O75167 634 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 KCNA4P22459 653 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 ATICP31939 592 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 LIMK1P53667 647 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 SEC13P55735 322 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 IFRD2Q12894 506 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 CUL4BQ13620 913 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 GAB4Q2WGN9 574 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 C2orf27AQ580R0 203 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 FILIP1Q7Z7B0 1213 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 CCDC26Q8TAB7 109 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 USP33Q8TEY7 942 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 DDX1Q92499 740 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 ZNF518BQ9C0D4 1074 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 MAGEF1Q9HAY2 307 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 SMPD4Q9NXE4 827 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 PCDHA7Q9UN72 937 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 INVSQ9Y283 1065 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 CPQQ9Y646 472 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 CNOT1A5YKK6 2376 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 HELZP42694 1942 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 SCAMP3O14828 347 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 EXOC3O60645 756 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 RHOBTB1O94844 696 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 STAU1O95793 577 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 OLFM2O95897 454 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 OAS1P00973 400 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 CYP17A1P05093 508 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 MPLP40238 635 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 SLC6A11P48066 632 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 CASP4P49662 377 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 CDH8P55286 799 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 DHCR24Q15392 516 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 ELF2Q15723 593 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 KNOP1Q1ED39 458 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 STPG1Q5TH74 334 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 C12orf56Q8IXR9 622 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 NUP93Q8N1F7 819 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 CCDC33Q8N5R6 958 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 B3GALNT2Q8NCR0 500 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 TSTD1Q8NFU3 115 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 PLEKHO2Q8TD55 490 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 SLITRK1Q96PX8 696 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 ELOVL4Q9GZR5 314 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 XYLT2Q9H1B5 865 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 VPS45Q9NRW7 570 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 FAM13BQ9NYF5 915 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 CGNQ9P2M7 1197 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 CHORDC1Q9UHD1 332 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 MYO16Q9Y6X6 1858 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 ACACBO00763 2458 aa14.24□□□□□ -0.13
POLR2J3-219ENST00000608621 ABCA7Q8IZY2 2146 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 MYOFQ9NZM1 2061 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 SLC9A3R1O14745 358 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 YWHAQP27348 245 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 GBP1P32455 592 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 ME1P48163 572 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 CREB5Q02930 508 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 BMT2Q1RMZ1 405 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 USP39Q53GS9 565 aaKnown RBP14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 RHBDF2Q6PJF5 856 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 KIAA1958Q8N8K9 716 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 ELMO3Q96BJ8 720 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 KCNK16Q96T55 309 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 PNKPQ96T60 521 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 TPSD1Q9BZJ3 242 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 CFAP97Q9P2B7 532 aa14.23□□□□□ -0.13
POLR2J3-219ENST00000608621 EPG5Q9HCE0 2579 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 BCLAF3A2AJT9 711 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 RTN3O95197 1032 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 CAVIN2O95810 425 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 C4BPAP04003 597 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 ZSCAN22P10073 491 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 MRPS21P82921 87 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 MESP2Q0VG99 397 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 BIRC3Q13489 604 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 N4BP2L1Q5TBK1 243 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 EMC10Q5UCC4 262 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 TCEAL6Q6IPX3 200 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 SFTPA1Q8IWL2 248 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 GRAMD1CQ8IYS0 662 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 SCAMP5Q8TAC9 235 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 TCEAL3Q969E4 200 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 FBXO32Q969P5 355 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 SNX21Q969T3 373 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 MED10Q9BTT4 135 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 SMYD3Q9H7B4 428 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 VRTNQ9H8Y1 702 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 SERTAD1Q9UHV2 236 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 MMP17Q9ULZ9 603 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 CACNA1BQ00975 2339 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 KIAA1549LQ6ZVL6 1849 aa14.22□□□□□ -0.13
POLR2J3-219ENST00000608621 LRRIQ3A6PVS8 624 aaPredicted RBP14.21□□□□□ -0.13
POLR2J3-219ENST00000608621 KLRC4O43908 158 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms