RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 KDSRQ06136 332 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 TAF10Q12962 218 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 BIRC3Q13489 604 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 FAM26FQ5R3K3 315 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 DDX42Q86XP3 938 aaKnown RBP eCLIP15.83■□□□□ 0.12
CTSA-216ENST00000607212 XXYLT1Q8NBI6 393 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 CEP295NLQ96MC4 621 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 TRIM9Q9C026 710 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 ELOVL4Q9GZR5 314 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 NACA2Q9H009 215 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 CUEDC2Q9H467 287 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 TFIP11Q9UBB9 837 aaKnown RBP15.83■□□□□ 0.12
CTSA-216ENST00000607212 EBF1Q9UH73 591 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 MYOFQ9NZM1 2061 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 ABCA7Q8IZY2 2146 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 BCLAF3A2AJT9 711 aaKnown RBP15.82■□□□□ 0.12
CTSA-216ENST00000607212 CLDN5O00501 218 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 KCNK5O95279 499 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 KLF8O95600 359 aaPredicted RBP15.82■□□□□ 0.12
CTSA-216ENST00000607212 ADH1CP00326 375 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 PTPN1P18031 435 aaKnown RBP15.82■□□□□ 0.12
CTSA-216ENST00000607212 CYP24A1Q07973 514 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 DHCR24Q15392 516 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 UAP1L1Q3KQV9 507 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 FOXD4L6Q3SYB3 417 aaPredicted RBP15.82■□□□□ 0.12
CTSA-216ENST00000607212 FOXD4L3Q6VB84 417 aaPredicted RBP15.82■□□□□ 0.12
CTSA-216ENST00000607212 IQUBQ8NA54 791 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 PIGKQ92643 395 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 FBXO32Q969P5 355 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 SPACA7Q96KW9 195 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 C8orf48Q96LL4 319 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 PNKPQ96T60 521 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 LSM14BQ9BX40 385 aaKnown RBP15.82■□□□□ 0.12
CTSA-216ENST00000607212 ZNF518BQ9C0D4 1074 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 RNF38Q9H0F5 515 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 DPEP3Q9H4B8 488 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 POLMQ9NP87 494 aaPredicted RBP15.82■□□□□ 0.12
CTSA-216ENST00000607212 AGPAT3Q9NRZ7 376 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 MMP17Q9ULZ9 603 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 SH3BP1Q9Y3L3 701 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 ACACBO00763 2458 aa15.82■□□□□ 0.12
CTSA-216ENST00000607212 CNOT1A5YKK6 2376 aaKnown RBP15.81■□□□□ 0.12
CTSA-216ENST00000607212 K7EQS6 105 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 EXOC3O60645 756 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 TACC1O75410 805 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 UBE4BO95155 1302 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 CST3P01034 146 aaPredicted RBP15.81■□□□□ 0.12
CTSA-216ENST00000607212 ADH5P11766 374 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 YWHAQP27348 245 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 SLC6A11P48066 632 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 NASPP49321 788 aaPredicted RBP15.81■□□□□ 0.12
CTSA-216ENST00000607212 MYL6P60660 151 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 NOP14P78316 857 aaKnown RBP15.81■□□□□ 0.12
CTSA-216ENST00000607212 SLC7A9P82251 487 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 MRPS21P82921 87 aaKnown RBP15.81■□□□□ 0.12
CTSA-216ENST00000607212 PSMD6Q15008 389 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 BTBD8Q5XKL5 378 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 PMS2CLQ68D20 193 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 SCARA5Q6ZMJ2 495 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 ARMCX6Q7L4S7 300 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 NUP93Q8N1F7 819 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 ALLCQ8N6M5 410 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 TXNDC5Q8NBS9 432 aaKnown RBP15.81■□□□□ 0.12
CTSA-216ENST00000607212 LINC00301Q8NCQ3 95 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 B3GALNT2Q8NCR0 500 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 SYAP1Q96A49 352 aaPredicted RBP15.81■□□□□ 0.12
CTSA-216ENST00000607212 CNOT6LQ96LI5 555 aaKnown RBP15.81■□□□□ 0.12
CTSA-216ENST00000607212 TTLL2Q9BWV7 592 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 BLZF1Q9H2G9 400 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 ARHGEF4Q9NR80 690 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 KBTBD4Q9NVX7 518 aa15.81■□□□□ 0.12
CTSA-216ENST00000607212 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.8■□□□□ 0.12
CTSA-216ENST00000607212 RTN3O95197 1032 aaPredicted RBP15.8■□□□□ 0.12
CTSA-216ENST00000607212 KAT7O95251 611 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 IRF1P10914 325 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 BCKDHBP21953 392 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 PMLP29590 882 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 ZXDBP98169 803 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 FOXC1Q12948 553 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 CRY1Q16526 586 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 ZNF699Q32M78 642 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 EOGTQ5NDL2 527 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 LIMS2Q7Z4I7 341 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 PDZD8Q8NEN9 1154 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 MDGA1Q8NFP4 955 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 ZNF507Q8TCN5 953 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 WHAMMQ8TF30 809 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 HMGB4Q8WW32 186 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 INTS4Q96HW7 963 aaKnown RBP15.8■□□□□ 0.12
CTSA-216ENST00000607212 SLC39A2Q9NP94 309 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 ZDHHC4Q9NPG8 344 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 TMEM9BQ9NQ34 198 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 TBC1D14Q9P2M4 693 aa15.8■□□□□ 0.12
CTSA-216ENST00000607212 MORC2Q9Y6X9 1032 aaPredicted RBP15.8■□□□□ 0.12
CTSA-216ENST00000607212 ANTXRLA6NF34 631 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 CUTAO60888 179 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 PPP6R2O75170 966 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 OAS1P00973 400 aaKnown RBP15.79■□□□□ 0.12
CTSA-216ENST00000607212 ATICP31939 592 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 HOXD13P35453 343 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms