RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 PFKLP17858 780 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 ATICP31939 592 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 CACNA2D1P54289 1103 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 NOP14P78316 857 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 ZXDBP98169 803 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 CAMKK1Q8N5S9 505 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 RPLP0P6Q8NHW5 317 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 NETO1Q8TDF5 533 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 EZH1Q92800 747 aaPredicted RBP22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 SYAP1Q96A49 352 aaPredicted RBP22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 XYLT2Q9H1B5 865 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 GDPD2Q9HCC8 539 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 ZNF840PA6NDX5 716 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 LRRIQ3A6PVS8 624 aaPredicted RBP22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 LEFTY2O00292 366 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 CLDN5O00501 218 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 PPP3CCP48454 512 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 TDRD10Q5VZ19 366 aaKnown RBP22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 CACNA2D4Q7Z3S7 1137 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 HHIPQ96QV1 700 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 B3GNT5Q9BYG0 378 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 ZNF518BQ9C0D4 1074 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 ELOVL4Q9GZR5 314 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 RNF38Q9H0F5 515 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 TMEM30AQ9NV96 361 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 DMAC2Q9NW81 257 aa22.56■■□□□ 1.2
PPFIA3-209ENST00000602783 PDXKO00764 312 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 NFATC1O95644 943 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 NR3C1P04150 777 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 DPYDQ12882 1025 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 IFRD2Q12894 506 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 TAF10Q12962 218 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 BIRC3Q13489 604 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 BECN1Q14457 450 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 KRBA2Q6ZNG9 492 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 KBTBD6Q86V97 674 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 SLC9A9Q8IVB4 645 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 B3GALNT2Q8NCR0 500 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 PARD3BQ8TEW8 1205 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 CCDC47Q96A33 483 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 ARRDC1-AS1Q9H2J1 176 aa22.55■■□□□ 1.2
PPFIA3-209ENST00000602783 SPAG17Q6Q759 2223 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 SLC30A4O14863 429 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 GDF9O60383 454 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 RHOBTB3O94955 611 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 CLSTN1O94985 981 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 CDH8P55286 799 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 SLC7A9P82251 487 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 SYT13Q7L8C5 426 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 TMEM174Q8WUU8 243 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 SLITRK1Q96PX8 696 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 SMYD3Q9H7B4 428 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 SMPD4Q9NXE4 827 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 CPQQ9Y646 472 aa22.54■■□□□ 1.2
PPFIA3-209ENST00000602783 FOXD2O60548 495 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 RAP1GAPP47736 663 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 AP3M2P53677 418 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 CLDN10P78369 228 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 DMC1Q14565 340 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 CCDC6Q16204 474 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 ZNF699Q32M78 642 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 ZNF667Q5HYK9 610 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 FILIP1Q7Z7B0 1213 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 NUP93Q8N1F7 819 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 ACDQ96AP0 544 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 ELMO3Q96BJ8 720 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 LOXL4Q96JB6 756 aa22.53■■□□□ 1.2
PPFIA3-209ENST00000602783 CALUO43852 315 aaPredicted RBP22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 AKAP3O75969 853 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 OLFM2O95897 454 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 OAS1P00973 400 aaKnown RBP22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 C4BPAP04003 597 aaKnown RBP22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 YWHAQP27348 245 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 OPRD1P41143 372 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 DLG4P78352 724 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 NCOA4Q13772 614 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 CEP135Q66GS9 1140 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 ADGRG2Q8IZP9 1017 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 KCNK16Q96T55 309 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 MED10Q9BTT4 135 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 VRTNQ9H8Y1 702 aa22.52■■□□□ 1.2
PPFIA3-209ENST00000602783 SCAMP3O14828 347 aaKnown RBP22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 ZNF202O95125 648 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 RTN3O95197 1032 aaPredicted RBP22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 EPN2O95208 641 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 KIF20AO95235 890 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 APBB3O95704 486 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 MBL2P11226 248 aaPredicted RBP22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 SF3A2Q15428 464 aaKnown RBP22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 SCARA5Q6ZMJ2 495 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 CCDC26Q8TAB7 109 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 FBXO32Q969P5 355 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 CFAP97Q9P2B7 532 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 CHORDC1Q9UHD1 332 aaPredicted RBP22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 TRAF3IP3Q9Y228 551 aa22.51■■□□□ 1.19
PPFIA3-209ENST00000602783 K7EQS6 105 aa22.5■■□□□ 1.19
PPFIA3-209ENST00000602783 SLC9A3R1O14745 358 aaPredicted RBP22.5■■□□□ 1.19
PPFIA3-209ENST00000602783 VNN1O95497 513 aa22.5■■□□□ 1.19
PPFIA3-209ENST00000602783 CYP17A1P05093 508 aa22.5■■□□□ 1.19
PPFIA3-209ENST00000602783 ZNF806P0C7X5 589 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms