RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-233	ENST00000602421	SMARCB1	Q12824	385 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	EFHC1	Q5JVL4	640 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	CC2D1A	Q6P1N0	951 aa	Predicted RBP	18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	SLC26A9	Q7LBE3	791 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	CREG2	Q8IUH2	290 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	HERC6	Q8IVU3	1022 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	RNF168	Q8IYW5	571 aa	Predicted RBP	18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	MYRIP	Q8NFW9	859 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	CLEC4C	Q8WTT0	213 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	RXFP2	Q8WXD0	754 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	KRT35	Q92764	455 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	PIWIL1	Q96J94	861 aa	Known RBP	18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	VN1R3	Q9BXE9	311 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	TMEM30A	Q9NV96	361 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	PCDHB12	Q9Y5F1	795 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	PCDHA3	Q9Y5H8	950 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421		F8VP50	259 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	CEP104	O60308	925 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	GRAP2	O75791	330 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	PDGFRA	P16234	1089 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	ATP2A2	P16615	1042 aa	Known RBP	18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	DES	P17661	470 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	CYP2F1	P24903	491 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	RABGGTB	P53611	331 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	MRPS5	P82675	430 aa	Known RBP	18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	PSMD5	Q16401	504 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	CFAP221	Q4G0U5	840 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	RHOT1	Q8IXI2	618 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	PIK3R5	Q8WYR1	880 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	RAD9A	Q99638	391 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	CNPY3	Q9BT09	278 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	HERC2P3	Q9BVR0	1158 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	ULBP1	Q9BZM6	244 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	PNPLA8	Q9NP80	782 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	CHST7	Q9NS84	486 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	ASNSD1	Q9NWL6	643 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	MTRR	Q9UBK8	725 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	BACE2	Q9Y5Z0	518 aa		18.83	■□□□□ 0.61
MACF1-233	ENST00000602421	CTAGE15	A4D2H0	777 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	C2CD4B	A6NLJ0	364 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	HHLA1	C9JL84	531 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	SART1	O43290	800 aa	Known RBP	18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	CTAGE8	P0CG41	777 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	NDUFV1	P49821	464 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	PEX5	P50542	639 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	ZNF143	P52747	638 aa	Predicted RBP	18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	RWDD2B	P57060	319 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	ADCY1	Q08828	1119 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	GPR17	Q13304	367 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	ACAP1	Q15027	740 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	TAF5	Q15542	800 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	RAB41	Q5JT25	222 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	VSTM1	Q6UX27	236 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	DDX53	Q86TM3	631 aa	Known RBP	18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	CTAGE6	Q86UF2	777 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	SCN4B	Q8IWT1	228 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	CTAGE4	Q8IX94	777 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	ALG3	Q92685	438 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	MS4A14	Q96JA4	679 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	PGLYRP2	Q96PD5	576 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	CARD9	Q9H257	536 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	CNGB3	Q9NQW8	809 aa		18.83	■□□□□ 0.6
MACF1-233	ENST00000602421	CCDC85C	A6NKD9	419 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	DPYSL4	O14531	572 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	PSTPIP1	O43586	416 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	TLL1	O43897	1013 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	HSF2BP	O75031	334 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	RNF8	O76064	485 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	SDC4	P31431	198 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	FLT3	P36888	993 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	MAGEA11	P43364	429 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	MARCKSL1	P49006	195 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	GLUD2	P49448	558 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	TERF1	P54274	439 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	KRT17	Q04695	432 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	RSPO2	Q6UXX9	243 aa	Predicted RBP	18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	ARC	Q7LC44	396 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	GPRIN1	Q7Z2K8	1008 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	PIAS4	Q8N2W9	510 aa	Predicted RBP	18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	FBXO22	Q8NEZ5	403 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	SPPL2B	Q8TCT7	592 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	C2orf15	Q8WU43	125 aa	Known RBP	18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	FAM149B1	Q96BN6	582 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	STK39	Q9UEW8	545 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	CDY1	Q9Y6F8	540 aa		18.82	■□□□□ 0.6
MACF1-233	ENST00000602421	VWA8	A3KMH1	1905 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	MTMR11	A4FU01	709 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	C2CD2L	O14523	706 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	TRIM66	O15016	1216 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	ZBED1	O96006	694 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	GLI1	P08151	1106 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	DAOA	P59103	153 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	TAS2R40	P59535	323 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	DSG1	Q02413	1049 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	HADH	Q16836	314 aa	Known RBP	18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	SEL1L2	Q5TEA6	688 aa		18.81	■□□□□ 0.6
MACF1-233	ENST00000602421	LRRC38	Q5VT99	294 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms