RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 RAB41Q5JT25 222 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 PPP1R2P3Q6NXS1 205 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 MMS22LQ6ZRQ5 1243 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 MON1BQ7L1V2 547 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 TMEM110Q86TL2 294 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 MSANTD4Q8NCY6 345 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 GAS2L1Q99501 681 aaPredicted RBP21.56■■□□□ 1.04
PNKP-215ENST00000600910 C11orf70Q9BRQ4 267 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 LRRC4Q9HBW1 653 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 CYLDQ9NQC7 956 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 DPP7Q9UHL4 492 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 REV3LO60673 3130 aa21.56■■□□□ 1.04
PNKP-215ENST00000600910 IPO7O95373 1038 aaKnown RBP21.55■■□□□ 1.04
PNKP-215ENST00000600910 ERBB2P04626 1255 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 LCP1P13796 627 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 ACADSBP45954 432 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 ADIGQ0VDE8 80 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 KCNC3Q14003 757 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 DENND5BQ6ZUT9 1274 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 TOGARAM2Q6ZUX3 1019 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 Q7L0L9 218 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 MCOLN2Q8IZK6 566 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 NUP93Q8N1F7 819 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 ACRBPQ8NEB7 543 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 VN1R2Q8NFZ6 395 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 SCAMP5Q8TAC9 235 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 IPO4Q8TEX9 1081 aaKnown RBP21.55■■□□□ 1.04
PNKP-215ENST00000600910 HDAC7Q8WUI4 952 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 DESI2Q9BSY9 194 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 ADAM22Q9P0K1 906 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 LRG1P02750 347 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 TKTL1P51854 596 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 IFRD2Q12894 506 aaPredicted RBP21.55■■□□□ 1.04
PNKP-215ENST00000600910 PTP4A2Q12974 167 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 PLD1Q13393 1074 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 MTMR3Q13615 1198 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 PPM1LQ5SGD2 360 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 CYP4A22Q5TCH4 519 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 C18orf8Q96DM3 657 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 CEP295NLQ96MC4 621 aa21.55■■□□□ 1.04
PNKP-215ENST00000600910 PRRC2BQ5JSZ5 2229 aaKnown RBP21.55■■□□□ 1.04
PNKP-215ENST00000600910 SLC38A8A6NNN8 435 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 RFPL2O75678 378 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 ZMYND10O75800 440 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 ABCB4P21439 1286 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 GABRB2P47870 512 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 EPHB3P54753 998 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 C1QBPQ07021 282 aaKnown RBP21.54■■□□□ 1.04
PNKP-215ENST00000600910 VEPH1Q14D04 833 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 ELMSAN1Q6PJG2 1045 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 RTL10Q7L3V2 364 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 SCUBE3Q8IX30 993 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 SIX6OS1Q8N1H7 587 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 PACSIN1Q9BY11 444 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 MIS12Q9H081 205 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 REXO2Q9Y3B8 237 aaKnown RBP21.54■■□□□ 1.04
PNKP-215ENST00000600910 PCDHA13Q9Y5I0 950 aa21.54■■□□□ 1.04
PNKP-215ENST00000600910 SPDYE4A6NLX3 237 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 CALB1P05937 261 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 MAGEA1P43355 309 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 GALCP54803 685 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 SNX16P57768 344 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 USP46P62068 366 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 C10orf76Q5T2E6 689 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 EFHBQ8N7U6 833 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 CASP10Q92851 521 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 VCPIP1Q96JH7 1222 aa21.53■■□□□ 1.04
PNKP-215ENST00000600910 CCL16O15467 120 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 LINC01565O15544 149 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 PAPSS1O43252 624 aaPredicted RBP21.52■■□□□ 1.04
PNKP-215ENST00000600910 GLP2RO95838 553 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 H2AFZP0C0S5 128 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 CSH1P0DML2 217 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 CSH2P0DML3 217 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 KRT83P78385 493 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 H2AFVQ71UI9 128 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 PHLDB2Q86SQ0 1253 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 XYLT1Q86Y38 959 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 MICALL1Q8N3F8 863 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 CLEC4CQ8WTT0 213 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 ULBP1Q9BZM6 244 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 THAP2Q9H0W7 228 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 STRIP2Q9ULQ0 834 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 MAGED2Q9UNF1 606 aaPredicted RBP21.52■■□□□ 1.04
PNKP-215ENST00000600910 USP3Q9Y6I4 520 aa21.52■■□□□ 1.04
PNKP-215ENST00000600910 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.52■■□□□ 1.04
PNKP-215ENST00000600910 GREB1Q4ZG55 1949 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 ANKRD62A6NC57 917 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 RTN3O95197 1032 aaPredicted RBP21.51■■□□□ 1.03
PNKP-215ENST00000600910 USP17L7P0C7H9 530 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 HOXA9P31269 272 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 TAF12Q16514 161 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 OR6B2Q6IFH4 312 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 FAM183BPQ6ZVS7 135 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 MYLIPQ8WY64 445 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 PSMG2Q969U7 264 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 ZNF653Q96CK0 615 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 TRIM11Q96F44 468 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 FBXO44Q9H4M3 255 aa21.51■■□□□ 1.03
PNKP-215ENST00000600910 LUC7LQ9NQ29 371 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms