RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ADPGKQ9BRR6 497 aa21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 POLR2AP24928 1970 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 BRCA1P38398 1863 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 A0A0G2JMZ2 1700 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 LRRC37A2A6NM11 1700 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 LACTBL1A8MY62 500 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 CILPO75339 1184 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 AVILO75366 819 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 ZC3H12AQ5D1E8 599 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 JADE1Q6IE81 842 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 DARS2Q6PI48 645 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 MTDHQ86UE4 582 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 RFWD2Q8NHY2 731 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 SLC16A10Q8TF71 515 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 TMEM176AQ96HP8 235 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 PPME1Q9Y570 386 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 TCRBV9S1A1TA0A576 114 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 KBTBD13C9JR72 458 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 LGR5O75473 907 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 USP2O75604 605 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 ATP2A2P16615 1042 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 GPD2P43304 727 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 CDH6P55285 790 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 CELF3Q5SZQ8 465 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 FYB2Q5VWT5 728 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 TRNP1Q6NT89 227 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 EFCAB12Q6NXP0 572 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 AGGF1Q8N302 714 aaeCLIP21.13■□□□□ 0.977e-20■■■■□ 22.6
SHKBP1-225ENST00000600733 COPS5Q92905 334 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 PIWIL1Q96J94 861 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 PPP1R16BQ96T49 567 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 TBC1D10AQ9BXI6 508 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 KANSL3Q9P2N6 904 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 ZFP69BQ9UJL9 534 aa21.13■□□□□ 0.97
SHKBP1-225ENST00000600733 SOCS7O14512 581 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 C2CD2LO14523 706 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 TM9SF1O15321 606 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 EPHB2P29323 1055 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 ROR1Q01973 937 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 C15orf59Q2T9L4 293 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 KBTBD12Q3ZCT8 623 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 CYP4V2Q6ZWL3 525 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 INPP5DQ92835 1189 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 SERAC1Q96JX3 654 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 SPATA33Q96N06 139 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 ZNF570Q96NI8 536 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 CYTH2Q99418 400 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 MANSC1Q9H8J5 431 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 RSAD1Q9HA92 442 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 NKX1-2Q9UD57 310 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 KAT6AQ92794 2004 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 GRAP2O75791 330 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 IL18RAPO95256 599 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 PTK7Q13308 1070 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 CDO1Q16878 200 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 SLC45A4Q5BKX6 768 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 FAM13CQ8NE31 585 aa21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 HEXIM2Q96MH2 286 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-225ENST00000600733 MCM3APO60318 1980 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 LPXNO60711 386 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 MT-ND3P03897 115 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 STAG3L1P0CL83 205 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 GM2AP17900 193 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 GABRB2P47870 512 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 NOMO1Q15155 1222 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 C1orf228Q6PIY5 440 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 GADL1Q6ZQY3 521 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 PLPPR4Q7Z2D5 763 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 LONP2Q86WA8 852 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 LRRC6Q86X45 466 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 CXorf38Q8TB03 319 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 ASNSD1Q9NWL6 643 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 TNFSF13BQ9Y275 285 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 A0A0G2JND7 137 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 WFS1O76024 890 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 TROVE2P10155 538 aaKnown RBP eCLIP21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 GCLCP48506 637 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 ZNF143P52747 638 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 YWHAGP61981 247 aaKnown RBP eCLIP21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 FAAP100Q0VG06 881 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 MAP1SQ66K74 1059 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 CLNKQ7Z7G1 428 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 FBXO16Q8IX29 292 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 KCNV2Q8TDN2 545 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 ALKBH8Q96BT7 664 aaKnown RBP21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 FGD4Q96M96 766 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 VPS11Q9H270 941 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 TEX264Q9Y6I9 313 aa21.11■□□□□ 0.97
SHKBP1-225ENST00000600733 KCNJ11Q14654 390 aa21.1■□□□□ 0.97
SHKBP1-225ENST00000600733 RXFP2Q8WXD0 754 aa21.1■□□□□ 0.97
SHKBP1-225ENST00000600733 IKBKGQ9Y6K9 419 aa21.1■□□□□ 0.97
SHKBP1-225ENST00000600733 H7C0C1 242 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 SMAPO00193 183 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 MAP3K6O95382 1288 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 PDGFRAP16234 1089 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 CYP3A5P20815 502 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 GPD1P21695 349 aa21.09■□□□□ 0.97
SHKBP1-225ENST00000600733 PCK1P35558 622 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms