RNA–Protein interactions for RNA: ENST00000599220.1

TMEM143-210, Transcript of transmembrane protein 143, humanhuman

TSL 3

Gene TMEM143, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-210ENST00000599220 SCFD1Q8WVM8 642 aa17.53■□□□□ 0.4
TMEM143-210ENST00000599220 FOXD4L4Q8WXT5 416 aaPredicted RBP17.53■□□□□ 0.4
TMEM143-210ENST00000599220 C8orf48Q96LL4 319 aa17.53■□□□□ 0.4
TMEM143-210ENST00000599220 ZNF396Q96N95 335 aaPredicted RBP17.53■□□□□ 0.4
TMEM143-210ENST00000599220 C7orf25Q9BPX7 421 aa17.53■□□□□ 0.4
TMEM143-210ENST00000599220 TPSD1Q9BZJ3 242 aa17.53■□□□□ 0.4
TMEM143-210ENST00000599220 ZNF518BQ9C0D4 1074 aa17.53■□□□□ 0.4
TMEM143-210ENST00000599220 NXF1Q9UBU9 619 aaKnown RBP17.53■□□□□ 0.4
TMEM143-210ENST00000599220 CNOT1A5YKK6 2376 aaKnown RBP17.52■□□□□ 0.4
TMEM143-210ENST00000599220 A8MXQ7 604 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 CAVIN2O95810 425 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 CYP17A1P05093 508 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 PPP3CCP48454 512 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 MYL6P60660 151 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 TRPC3Q13507 836 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 RNF43Q68DV7 783 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 ANO7Q6IWH7 933 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 SHC4Q6S5L8 630 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 TTC30AQ86WT1 665 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 ADGRG2Q8IZP9 1017 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 ZNF516Q92618 1163 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 B3GNT5Q9BYG0 378 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 ELOVL4Q9GZR5 314 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 BLZF1Q9H2G9 400 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 TMEM30AQ9NV96 361 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 CFAP97Q9P2B7 532 aa17.52■□□□□ 0.4
TMEM143-210ENST00000599220 K7ELQ4 463 aaPredicted RBP17.51■□□□□ 0.39
TMEM143-210ENST00000599220 POLR2DO15514 142 aaKnown RBP17.51■□□□□ 0.39
TMEM143-210ENST00000599220 CUTAO60888 179 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 CLSTN1O94985 981 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 OAS1P00973 400 aaKnown RBP17.51■□□□□ 0.39
TMEM143-210ENST00000599220 MBL2P11226 248 aaPredicted RBP17.51■□□□□ 0.39
TMEM143-210ENST00000599220 LAMA1P25391 3075 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 SLC6A11P48066 632 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 DHCR24Q15392 516 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 ST3GAL2Q16842 350 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
TMEM143-210ENST00000599220 USP39Q53GS9 565 aaKnown RBP17.51■□□□□ 0.39
TMEM143-210ENST00000599220 CNNM4Q6P4Q7 775 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
TMEM143-210ENST00000599220 UNC13DQ70J99 1090 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 SFTPA1Q8IWL2 248 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 B3GALNT2Q8NCR0 500 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 SNX21Q969T3 373 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 SLITRK1Q96PX8 696 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 SLC39A2Q9NP94 309 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 EPG5Q9HCE0 2579 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 ABCA7Q8IZY2 2146 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 KIAA1549LQ6ZVL6 1849 aa17.51■□□□□ 0.39
TMEM143-210ENST00000599220 UBE4BO95155 1302 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 BCLAF3A2AJT9 711 aaKnown RBP17.5■□□□□ 0.39
TMEM143-210ENST00000599220 SLC9A3R1O14745 358 aaPredicted RBP17.5■□□□□ 0.39
TMEM143-210ENST00000599220 PHACTR2O75167 634 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 YEATS4O95619 227 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 OLFM2O95897 454 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 FAM163BP0C2L3 166 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 YWHAQP27348 245 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 CASP4P49662 377 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 CDH8P55286 799 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 SNRPFP62306 86 aaKnown RBP17.5■□□□□ 0.39
TMEM143-210ENST00000599220 NUP93Q8N1F7 819 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 EDEM2Q9BV94 578 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 LSM14BQ9BX40 385 aaKnown RBP17.5■□□□□ 0.39
TMEM143-210ENST00000599220 GZF1Q9H116 711 aaPredicted RBP17.5■□□□□ 0.39
TMEM143-210ENST00000599220 MMP17Q9ULZ9 603 aa17.5■□□□□ 0.39
TMEM143-210ENST00000599220 EXOC3O60645 756 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 BCKDHBP21953 392 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 TIE1P35590 1138 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 AFMP43652 599 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 MRPS21P82921 87 aaKnown RBP17.49■□□□□ 0.39
TMEM143-210ENST00000599220 EHHADHQ08426 723 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 MESP2Q0VG99 397 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 CRY1Q16526 586 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 RHBDF2Q6PJF5 856 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 C12orf40Q86WS4 652 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 TXNDC5Q8NBS9 432 aaKnown RBP17.49■□□□□ 0.39
TMEM143-210ENST00000599220 MDGA1Q8NFP4 955 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 FBXO32Q969P5 355 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 SYAP1Q96A49 352 aaPredicted RBP17.49■□□□□ 0.39
TMEM143-210ENST00000599220 ELMO3Q96BJ8 720 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 CNOT6LQ96LI5 555 aaKnown RBP17.49■□□□□ 0.39
TMEM143-210ENST00000599220 KCNK16Q96T55 309 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 PNKPQ96T60 521 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 MED10Q9BTT4 135 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 XYLT2Q9H1B5 865 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 SMYD3Q9H7B4 428 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 CHORDC1Q9UHD1 332 aaPredicted RBP17.49■□□□□ 0.39
TMEM143-210ENST00000599220 ANGPTL2Q9UKU9 493 aa17.49■□□□□ 0.39
TMEM143-210ENST00000599220 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
TMEM143-210ENST00000599220 MYOFQ9NZM1 2061 aa17.48■□□□□ 0.39
TMEM143-210ENST00000599220 C4orf47A7E2U8 309 aa17.48■□□□□ 0.39
TMEM143-210ENST00000599220 KCNK5O95279 499 aa17.48■□□□□ 0.39
TMEM143-210ENST00000599220 STAU1O95793 577 aaKnown RBP17.48■□□□□ 0.39
TMEM143-210ENST00000599220 APODP05090 189 aa17.48■□□□□ 0.39
TMEM143-210ENST00000599220 HNRNPLP14866 589 aaKnown RBP eCLIP17.48■□□□□ 0.398e-9■■■■■ 38.5
TMEM143-210ENST00000599220 PMLP29590 882 aa17.48■□□□□ 0.39
TMEM143-210ENST00000599220 ATICP31939 592 aa17.48■□□□□ 0.39
TMEM143-210ENST00000599220 BIRC3Q13489 604 aa17.48■□□□□ 0.39
TMEM143-210ENST00000599220 KNOP1Q1ED39 458 aaKnown RBP17.48■□□□□ 0.39
TMEM143-210ENST00000599220 EMC10Q5UCC4 262 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms