RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 RFXAPO00287 272 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 CETN3O15182 167 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 CLDN3O15551 220 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 TGFB1I1O43294 461 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 LEFTY1O75610 366 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 NR3C1P04150 777 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 MCF2P10911 925 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 ARF4P18085 180 aaPredicted RBP11.21□□□□□ -0.61
SMG9-207ENST00000598860 PROZP22891 400 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 NR2F2P24468 414 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 STX17P56962 302 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 ERVK-21P61565 698 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 HTRA4P83105 476 aaPredicted RBP11.21□□□□□ -0.61
SMG9-207ENST00000598860 POU5F1Q01860 360 aaKnown RBP11.21□□□□□ -0.61
SMG9-207ENST00000598860 CYP27A1Q02318 531 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 SPAG1Q07617 926 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 NOLC1Q14978 699 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMG9-207ENST00000598860 IQCB1Q15051 598 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 ZNF568Q3ZCX4 644 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 ANKRD40Q6AI12 368 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 MPZL3Q6UWV2 235 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 FAM228AQ86W67 206 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 AOPEPQ8N6M6 819 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 PPM1EQ8WY54 764 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 POMGNT1Q8WZA1 660 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.61
SMG9-207ENST00000598860 YME1L1Q96TA2 773 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 THAP9Q9H5L6 903 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 ERVK-5Q9HDB9 667 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 SUSD2Q9UGT4 822 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 NOC2LQ9Y3T9 749 aaKnown RBP11.21□□□□□ -0.61
SMG9-207ENST00000598860 NFE2L3Q9Y4A8 694 aa11.21□□□□□ -0.61
SMG9-207ENST00000598860 CHD9Q3L8U1 2897 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 LINC01553A4QN01 128 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 ANKRD34BA5PLL1 514 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 MAPK13O15264 365 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 SLC16A3O15427 465 aaKnown RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 EPHX1P07099 455 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 FAM153BP0C7A2 387 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 EPB41P11171 864 aaKnown RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 NAT2P11245 290 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 ZSCAN20P17040 1043 aaPredicted RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 MATR3P43243 847 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMG9-207ENST00000598860 RAB27AP51159 221 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 ENPEPQ07075 957 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 MCL1Q07820 350 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 ADAM9Q13443 819 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 RNF187Q5TA31 235 aaPredicted RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 SLC39A4Q6P5W5 647 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 SLC27A1Q6PCB7 646 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 LRRC55Q6ZSA7 311 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 KIAA0907Q7Z7F0 614 aaPredicted RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 USP37Q86T82 979 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 RTN4RL1Q86UN2 441 aaPredicted RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 GPD1LQ8N335 351 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 XXYLT1Q8NBI6 393 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 ANKRD20A12PQ8NF67 263 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 DNAJB8Q8NHS0 232 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 MIPEPQ99797 713 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 TCHPQ9BT92 498 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 DUSP23Q9BVJ7 150 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 METTL14Q9HCE5 456 aaKnown RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 PTPRHQ9HD43 1115 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 DMAC2Q9NW81 257 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 HSPBP1Q9NZL4 362 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 ANKFY1Q9P2R3 1169 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 MAGEC2Q9UBF1 373 aaPredicted RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 ST3GAL5Q9UNP4 418 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 PIN4Q9Y237 131 aaKnown RBP11.2□□□□□ -0.62
SMG9-207ENST00000598860 FRMD4BQ9Y2L6 1034 aa11.2□□□□□ -0.62
SMG9-207ENST00000598860 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
SMG9-207ENST00000598860 A0A0B4J269 797 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 EPOPA6NHQ4 379 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 ANKRD63C9JTQ0 380 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 CLIC2O15247 247 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 OGTO15294 1046 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 B4GALT5O43286 388 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 EXOC3O60645 756 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 EDN1P05305 212 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 STAG3L1P0CL83 205 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 POU3F3P20264 500 aaPredicted RBP11.19□□□□□ -0.62
SMG9-207ENST00000598860 SV2CQ496J9 727 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 CYP27C1Q4G0S4 372 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 HEATR6Q6AI08 1181 aaKnown RBP11.19□□□□□ -0.62
SMG9-207ENST00000598860 FILIP1Q7Z7B0 1213 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 DHX40Q8IX18 779 aaKnown RBP11.19□□□□□ -0.62
SMG9-207ENST00000598860 HACE1Q8IYU2 909 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 CBWD1Q9BRT8 395 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 MSTO1Q9BUK6 570 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 TRIM6Q9C030 488 aaPredicted RBP11.19□□□□□ -0.62
SMG9-207ENST00000598860 MKRN2Q9H000 416 aaKnown RBP11.19□□□□□ -0.62
SMG9-207ENST00000598860 PDZD7Q9H5P4 517 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 C1orf112Q9NSG2 853 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 AGO2Q9UKV8 859 aaKnown RBP11.19□□□□□ -0.62
SMG9-207ENST00000598860 MTUS1Q9ULD2 1270 aa11.19□□□□□ -0.62
SMG9-207ENST00000598860 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
SMG9-207ENST00000598860 AGRPO00253 132 aa11.18□□□□□ -0.62
SMG9-207ENST00000598860 ABLIM1O14639 778 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms