RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	C7orf25	Q9BPX7	421 aa		11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	LSM14B	Q9BX40	385 aa	Known RBP	11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TPSD1	Q9BZJ3	242 aa		11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	SDCBP2	Q9H190	292 aa		11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TNMD	Q9H2S6	317 aa		11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TRPM5	Q9NZQ8	1165 aa		11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	PCDHGA5	Q9Y5G8	931 aa		11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CPQ	Q9Y646	472 aa		11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CACNA1G	O43497	2377 aa		11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ZNF638	Q14966	1978 aa	Known RBP	11.76	□□□□□ -0.53
GRAMD1A-209	ENST00000598580		A0A0A0MRY4	1105 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	PATE3	B3GLJ2	98 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	SGK1	O00141	431 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TNFRSF10B	O14763	440 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	KIAA0391	O15091	583 aa	Known RBP	11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	EIF3D	O15371	548 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	KCNA4	P22459	653 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	DGKE	P52429	567 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ASIC1	P78348	528 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	AMPD2	Q01433	879 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	STK38	Q15208	465 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	WDR72	Q3MJ13	1102 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	FAM26F	Q5R3K3	315 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	HS2ST1	Q7LGA3	356 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	GRAMD1C	Q8IYS0	662 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	C12orf50	Q8NA57	414 aa	Predicted RBP	11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	MDGA1	Q8NFP4	955 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	OR6B3	Q8NGW1	331 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	SCAMP5	Q8TAC9	235 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	OLIG1	Q8TAK6	271 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	P2RY11	Q96G91	374 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	SNX25	Q9H3E2	840 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	SMYD3	Q9H7B4	428 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	VPS45	Q9NRW7	570 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CFAP97	Q9P2B7	532 aa		11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.75	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	C4orf47	A7E2U8	309 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CDX4	O14627	284 aa	Predicted RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TRIM24	O15164	1050 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	KLRC4	O43908	158 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	GREM1	O60565	184 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ADAM23	O75077	832 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	PPP6R2	O75170	966 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	BEST1	O76090	585 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	KCNK5	O95279	499 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	VNN1	O95497	513 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CAVIN2	O95810	425 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TNNI1	P19237	187 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	KIR2DL1	P43626	348 aa	Predicted RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CREB5	Q02930	508 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CUL4B	Q13620	913 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	SURF1	Q15526	300 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	MAPRE1	Q15691	268 aa	Known RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CRY1	Q16526	586 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	BMT2	Q1RMZ1	405 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TDRD10	Q5VZ19	366 aa	Known RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	IL31	Q6EBC2	164 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ANO7	Q6IWH7	933 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ALLC	Q8N6M5	410 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	FSIP1	Q8NA03	581 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	IL17RC	Q8NAC3	791 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	XXYLT1	Q8NBI6	393 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ZMIZ2	Q8NF64	920 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TSTD1	Q8NFU3	115 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	RLN3	Q8WXF3	142 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CEP295NL	Q96MC4	621 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	FNBP1	Q96RU3	617 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	SLC39A2	Q9NP94	309 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	IL37	Q9NZH6	218 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	NXF1	Q9UBU9	619 aa	Known RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	MBD1	Q9UIS9	605 aa	Predicted RBP	11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	MMP17	Q9ULZ9	603 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	MYO16	Q9Y6X6	1858 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	MYOF	Q9NZM1	2061 aa		11.74	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	LNP1	A1A4G5	178 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580		A8MXQ7	604 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TRIM66	O15016	1216 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	POLR2D	O15514	142 aa	Known RBP	11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	COCH	O43405	550 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	FOXD2	O60548	495 aa	Predicted RBP	11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CUTA	O60888	179 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	NFATC1	O95644	943 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	STAU1	O95793	577 aa	Known RBP	11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	TOP3B	O95985	862 aa	Known RBP	11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ABL1	P00519	1130 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	C4BPA	P04003	597 aa	Known RBP	11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	FAM163B	P0C2L3	166 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	ZDHHC11B	P0C7U3	371 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	PFKL	P17858	780 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	PTPRD	P23468	1912 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	DLG4	P78352	724 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	CLDN10	P78369	228 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	IRX4	P78413	519 aa		11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	IFRD2	Q12894	506 aa	Predicted RBP	11.73	□□□□□ -0.53
GRAMD1A-209	ENST00000598580	NR1H3	Q13133	447 aa		11.73	□□□□□ -0.53

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