RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 A0A1W2PQ45 241 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 A0A1W2PQY0 241 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 GPR182O15218 404 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 ATP2C2O75185 946 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 RNF8O76064 485 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 TRUB2O95900 331 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 GAS8O95995 478 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 KDELR1P24390 212 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 TKTP29401 623 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 VPS41P49754 854 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 ZNF844Q08AG5 666 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 KCTD16Q68DU8 428 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 CYP4V2Q6ZWL3 525 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 TOP6BLQ8N6T0 577 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 ANKRD52Q8NB46 1076 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 SLC2A14Q8TDB8 520 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 DIS3LQ8TF46 1054 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 CFAP57Q96MR6 1250 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 MIS12Q9H081 205 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 TSPYL2Q9H2G4 693 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 LRRC4CQ9HCJ2 640 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 ASNSD1Q9NWL6 643 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 WHRNQ9P202 907 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 FEZ2Q9UHY8 353 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 USP18Q9UMW8 372 aa17.88■□□□□ 0.45
SHKBP1-216ENST00000598201 ARL5CA6NH57 179 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 CYB561D2O14569 222 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 WARSP23381 471 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 CDR1P51861 262 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 SLC6A3Q01959 620 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 ITGA7Q13683 1181 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 ACAP1Q15027 740 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 CCDC14Q49A88 953 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 WSCD1Q658N2 575 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 SH2D3CQ8N5H7 860 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 CLEC4CQ8WTT0 213 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 STK32AQ8WU08 396 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 PAWRQ96IZ0 340 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 STARD7Q9NQZ5 370 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 ACAT1P24752 427 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 PMS2P54278 862 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 DMTNQ08495 405 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 BST2Q10589 180 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 CALCOCO2Q13137 446 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 LPIN1Q14693 890 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 TAZQ16635 292 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 CDO1Q16878 200 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 GLIS1Q8NBF1 620 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 CMASQ8NFW8 434 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 HSPH1Q92598 858 aa17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 SAE1Q9UBE0 346 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 MTRF1LQ9UGC7 380 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-216ENST00000598201 THP07101 528 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 KLRC2P26717 231 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 PCK1P35558 622 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 SCNN1GP51170 649 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 CLCNKBP51801 687 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 BCAT1P54687 386 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 DYNLT1P63172 113 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 ATP11AP98196 1134 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 BYSLQ13895 437 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 TRIM71Q2Q1W2 868 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 RHBDF2Q6PJF5 856 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 MRPL10Q7Z7H8 261 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 B3GALNT2Q8NCR0 500 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 C3orf58Q8NDZ4 430 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 FAM76AQ8TAV0 307 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 SNF8Q96H20 258 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 SEMA4AQ9H3S1 761 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 AAASQ9NRG9 546 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 SLC38A7Q9NVC3 462 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 COL6A1P12109 1028 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 ITIH2P19823 946 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 ADCY8P40145 1251 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 LMAN1P49257 510 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 KIAA0319Q5VV43 1072 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 DRICH1Q6PGQ1 229 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 HACE1Q8IYU2 909 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 KCTD6Q8NC69 237 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 PAAF1Q9BRP4 392 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 TMBIM4Q9HC24 238 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 PSD3Q9NYI0 1048 aa17.86■□□□□ 0.45
SHKBP1-216ENST00000598201 GABRDO14764 452 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 RPLP2P05387 115 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 ATF2P15336 505 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 RPL34P49207 117 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 ITGA8P53708 1063 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 DSC3Q14574 896 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 OASLQ15646 514 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 SPDYCQ5MJ68 293 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 ZNF365Q70YC5 407 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 NECAB2Q7Z6G3 386 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 FUKQ8N0W3 1084 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 RNF169Q8NCN4 708 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 TNIP3Q96KP6 325 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 SENP8Q96LD8 212 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 PABPC3Q9H361 631 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 C11orf49Q9H6J7 331 aa17.85■□□□□ 0.45
SHKBP1-216ENST00000598201 ZNF148Q9UQR1 794 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms