RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 SMARCD1Q96GM5 515 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 KCNK16Q96T55 309 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 GTPBP4Q9BZE4 634 aaKnown RBP24.44■■□□□ 1.5
SSBP4-205ENST00000598159 ECT2Q9H8V3 914 aa24.44■■□□□ 1.5
SSBP4-205ENST00000598159 HOOK1Q9UJC3 728 aaKnown RBP24.44■■□□□ 1.5
SSBP4-205ENST00000598159 SMC2O95347 1197 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 ABL1P00519 1130 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 SLC7A9P82251 487 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 SATB1Q01826 763 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 PPP3CAQ08209 521 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 COBLL1Q53SF7 1204 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 ZNF658Q5TYW1 1059 aaPredicted RBP24.43■■□□□ 1.5
SSBP4-205ENST00000598159 SPOPLQ6IQ16 392 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 TTC16Q8NEE8 873 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 PDZD8Q8NEN9 1154 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 TIGD1Q96MW7 591 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 RNF38Q9H0F5 515 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 CYP3A43Q9HB55 503 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 TMEM8AQ9HCN3 771 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 DMAP1Q9NPF5 467 aaPredicted RBP24.43■■□□□ 1.5
SSBP4-205ENST00000598159 IL37Q9NZH6 218 aa24.43■■□□□ 1.5
SSBP4-205ENST00000598159 CETN3O15182 167 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 TRIM49P0CI25 452 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 TRIM49CP0CI26 452 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 GJA4P35212 333 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 ASPAP45381 313 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 GALK1P51570 392 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 EML3Q32P44 896 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 Q6ZS52 159 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 SMYD4Q8IYR2 804 aaPredicted RBP24.42■■□□□ 1.5
SSBP4-205ENST00000598159 FUKQ8N0W3 1084 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 CCDC150Q8NCX0 1101 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 EPC1Q9H2F5 836 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 WNT6Q9Y6F9 365 aa24.42■■□□□ 1.5
SSBP4-205ENST00000598159 LEFTY2O00292 366 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 TNFRSF10BO14763 440 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 AP1G2O75843 785 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 OLFM2O95897 454 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 OAS1P00973 400 aaKnown RBP24.41■■□□□ 1.5
SSBP4-205ENST00000598159 DRD1P21728 446 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 PRCPP42785 496 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 IFRD2Q12894 506 aaPredicted RBP24.41■■□□□ 1.5
SSBP4-205ENST00000598159 KRT39Q6A163 491 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 FSTL4Q6MZW2 842 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 SPATA20Q8TB22 786 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 TAS1R2Q8TE23 839 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 FBXO32Q969P5 355 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 CHFRQ96EP1 664 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 FAXDC2Q96IV6 333 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 HINFPQ9BQA5 517 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 DNAI2Q9GZS0 605 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 LINC00597Q9H2U6 94 aa24.41■■□□□ 1.5
SSBP4-205ENST00000598159 MYH10P35580 1976 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 HELZP42694 1942 aaKnown RBP24.4■■□□□ 1.5
SSBP4-205ENST00000598159 STX10O60499 249 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 ATG13O75143 517 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 EPB41P11171 864 aaKnown RBP24.4■■□□□ 1.5
SSBP4-205ENST00000598159 ZXDBP98169 803 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 INCA1Q0VD86 236 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 SNX30Q5VWJ9 437 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 ELOA2Q8IYF1 753 aaPredicted RBP24.4■■□□□ 1.5
SSBP4-205ENST00000598159 SMARCE1Q969G3 411 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 TSG101Q99816 390 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 P2RY13Q9BPV8 354 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 MMRN2Q9H8L6 949 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 APOBEC3GQ9HC16 384 aaKnown RBP24.4■■□□□ 1.5
SSBP4-205ENST00000598159 CSNK1G1Q9HCP0 422 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 CHORDC1Q9UHD1 332 aaPredicted RBP24.4■■□□□ 1.5
SSBP4-205ENST00000598159 PCDHA5Q9Y5H7 936 aa24.4■■□□□ 1.5
SSBP4-205ENST00000598159 NFATC1O95644 943 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 HOXA6P31267 233 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 SLC5A3P53794 718 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 FBXO43Q4G163 708 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 DDX42Q86XP3 938 aaKnown RBP eCLIP24.39■■□□□ 1.49
SSBP4-205ENST00000598159 SCAMP5Q8TAC9 235 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 SLC2A14Q8TDB8 520 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 SECISBP2LQ93073 1101 aaKnown RBP24.39■■□□□ 1.49
SSBP4-205ENST00000598159 SMOQ99835 787 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 NT5C1AQ9BXI3 368 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.39■■□□□ 1.495e-8■■■■■ 144.6
SSBP4-205ENST00000598159 KRT82Q9NSB4 513 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 CPQQ9Y646 472 aa24.39■■□□□ 1.49
SSBP4-205ENST00000598159 FAM92AA1XBS5 289 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 K7ESF4 209 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 SLC9A3R1O14745 358 aaPredicted RBP24.38■■□□□ 1.49
SSBP4-205ENST00000598159 CCDC130P13994 396 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 CNR2P34972 360 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 FKBP3Q00688 224 aaKnown RBP24.38■■□□□ 1.49
SSBP4-205ENST00000598159 HECTD3Q5T447 861 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 ADGRG2Q8IZP9 1017 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 C12orf29Q8N999 325 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 ZMIZ2Q8NF64 920 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 CD101Q93033 1021 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 CYFIP2Q96F07 1278 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 EEF2KMTQ96G04 330 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 HNRNPABQ99729 332 aaKnown RBP24.38■■□□□ 1.49
SSBP4-205ENST00000598159 NIF3L1Q9GZT8 377 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 FBXO44Q9H4M3 255 aa24.38■■□□□ 1.49
SSBP4-205ENST00000598159 FBRSL1Q9HCM7 1045 aaKnown RBP24.38■■□□□ 1.49
SSBP4-205ENST00000598159 HMGXB4Q9UGU5 601 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms