RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 C5orf42Q9H799 3197 aa15.16■□□□□ 0.02
VRK3-213ENST00000597215 MYO16Q9Y6X6 1858 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 GYPCP04921 128 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 TPM1P09493 284 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 CCR2P41597 374 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 ZNF75DP51815 510 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 USP46P62068 366 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 ZBED6P86452 979 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 ARID5AQ03989 594 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 IFRD2Q12894 506 aaPredicted RBP15.15■□□□□ 0.02
VRK3-213ENST00000597215 ASIC2Q16515 512 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 SLC5A9Q2M3M2 681 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 SFMBT2Q5VUG0 894 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 DENND1BQ6P3S1 775 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 GAREM2Q75VX8 874 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 OTOP3Q7RTS5 596 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 GPRIN1Q7Z2K8 1008 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 NOP9Q86U38 636 aaKnown RBP15.15■□□□□ 0.02
VRK3-213ENST00000597215 GPIHBP1Q8IV16 184 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
VRK3-213ENST00000597215 PDZD8Q8NEN9 1154 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 SCAMP5Q8TAC9 235 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 ITFG1Q8TB96 612 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 SLC35F5Q8WV83 523 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 CPLX3Q8WVH0 158 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 FBXO32Q969P5 355 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 TCEAL4Q96EI5 215 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 MRFAP1L1Q96HT8 127 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 SLITRK1Q96PX8 696 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 LHX5Q9H2C1 402 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.15■□□□□ 0.02
VRK3-213ENST00000597215 IL37Q9NZH6 218 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 NOCTQ9UK39 431 aaKnown RBP15.15■□□□□ 0.02
VRK3-213ENST00000597215 LUC7L2Q9Y383 392 aaKnown RBP15.15■□□□□ 0.02
VRK3-213ENST00000597215 NR2E1Q9Y466 385 aa15.15■□□□□ 0.02
VRK3-213ENST00000597215 OBSL1O75147 1896 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 DENND4CQ5VZ89 1909 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 A0A1W2PRU2 124 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 TULP2O00295 520 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 F11P03951 625 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 CFHP08603 1231 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 CEBPBP17676 345 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 GPD2P43304 727 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 PPP3CCP48454 512 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 KIF11P52732 1056 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 CDR2Q01850 454 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 ARHGAP15Q53QZ3 475 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 RAB41Q5JT25 222 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 TAF3Q5VWG9 929 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 PASD1Q8IV76 773 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 SHKBP1Q8TBC3 707 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 ING5Q8WYH8 240 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 KCTD13Q8WZ19 329 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 OVCA2Q8WZ82 227 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 DDX1Q92499 740 aaKnown RBP15.14■□□□□ 0.01
VRK3-213ENST00000597215 ACSF2Q96CM8 615 aaPredicted RBP15.14■□□□□ 0.01
VRK3-213ENST00000597215 HSFY1Q96LI6 401 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 ATXN3LQ9H3M9 355 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 LRRC4Q9HBW1 653 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 AIPL1Q9NZN9 384 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 TRPM5Q9NZQ8 1165 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 PRKAG3Q9UGI9 489 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 USTQ9Y2C2 406 aa15.14■□□□□ 0.01
VRK3-213ENST00000597215 DOCK8Q8NF50 2099 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 FAM92AA1XBS5 289 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 MOSPD3O75425 235 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 TADA3O75528 432 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 LSM8O95777 96 aaKnown RBP15.13■□□□□ 0.01
VRK3-213ENST00000597215 CASP14P31944 242 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 GBP2P32456 591 aaPredicted RBP15.13■□□□□ 0.01
VRK3-213ENST00000597215 ACADSBP45954 432 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 RGS7P49802 495 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 TAF10Q12962 218 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 TEAD2Q15562 447 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 PMF1Q6P1K2 205 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 TMC6Q7Z403 805 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 IRF2BP2Q7Z5L9 587 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 NPAS3Q8IXF0 933 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 SIX6OS1Q8N1H7 587 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 TDRD5Q8NAT2 981 aaKnown RBP15.13■□□□□ 0.01
VRK3-213ENST00000597215 TMEM35BQ8NCS4 154 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 STK32AQ8WU08 396 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 SLC20A1Q8WUM9 679 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 MRPS31Q92665 395 aaKnown RBP15.13■□□□□ 0.01
VRK3-213ENST00000597215 SYN2Q92777 582 aaPredicted RBP15.13■□□□□ 0.01
VRK3-213ENST00000597215 NOX5Q96PH1 765 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 CYLDQ9NQC7 956 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 ZMYM5Q9UJ78 669 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 CDH7Q9ULB5 785 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 SCML2Q9UQR0 700 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 USP3Q9Y6I4 520 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 ZFP37Q9Y6Q3 630 aaPredicted RBP15.13■□□□□ 0.01
VRK3-213ENST00000597215 UNC80Q8N2C7 3258 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 NCANO14594 1321 aa15.13■□□□□ 0.01
VRK3-213ENST00000597215 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
VRK3-213ENST00000597215 MMEP08473 750 aa15.12■□□□□ 0.01
VRK3-213ENST00000597215 BMP1P13497 986 aa15.12■□□□□ 0.01
VRK3-213ENST00000597215 GJA1P17302 382 aa15.12■□□□□ 0.01
VRK3-213ENST00000597215 DDX6P26196 483 aaKnown RBP eCLIP15.12■□□□□ 0.01
VRK3-213ENST00000597215 TKTL1P51854 596 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms