RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 PHTF2Q8N3S3 785 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 ZNF843Q8N446 348 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 LEO1Q8WVC0 666 aaPredicted RBP16.6■□□□□ 0.25
LIG1-214ENST00000597146 TSPAN18Q96SJ8 248 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 CCSER1Q9C0I3 900 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 KIAA1522Q9P206 1035 aaPredicted RBP16.6■□□□□ 0.25
LIG1-214ENST00000597146 CPSF3Q9UKF6 684 aaKnown RBP16.6■□□□□ 0.25
LIG1-214ENST00000597146 STK24Q9Y6E0 443 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 HCRTO43612 131 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 HOXB2P14652 356 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 GUCY2CP25092 1073 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 CDC25AP30304 524 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 EIF2DP41214 584 aaKnown RBP16.59■□□□□ 0.25
LIG1-214ENST00000597146 GRIA2P42262 883 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 SMTNP53814 917 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 KYAT1Q16773 422 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 RHBDF2Q6PJF5 856 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 SCN4BQ8IWT1 228 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 ADGRG2Q8IZP9 1017 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 ZNF513Q8N8E2 541 aaPredicted RBP16.59■□□□□ 0.25
LIG1-214ENST00000597146 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 BAHD1Q8TBE0 780 aaPredicted RBP16.59■□□□□ 0.25
LIG1-214ENST00000597146 MSTO1Q9BUK6 570 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 PRDM16Q9HAZ2 1276 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 SMPD4Q9NXE4 827 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 HCN2Q9UL51 889 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
LIG1-214ENST00000597146 TP53BP1Q12888 1972 aaPredicted RBP16.58■□□□□ 0.25
LIG1-214ENST00000597146 CABIN1Q9Y6J0 2220 aa16.58■□□□□ 0.25
LIG1-214ENST00000597146 KNL1Q8NG31 2342 aa16.58■□□□□ 0.25
LIG1-214ENST00000597146 KPNA7A9QM74 516 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 DKK1O94907 266 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 ADH5P11766 374 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 NDUFV2P19404 249 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 PDIA5Q14554 519 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 INTS6LQ5JSJ4 861 aaKnown RBP16.58■□□□□ 0.24
LIG1-214ENST00000597146 MIB1Q86YT6 1006 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 CD302Q8IX05 232 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 C4orf32Q8N8J7 132 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 PKMYT1Q99640 499 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 BACH2Q9BYV9 841 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 SLC6A17Q9H1V8 727 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 FAM124BQ9H5Z6 455 aaPredicted RBP16.58■□□□□ 0.24
LIG1-214ENST00000597146 ABCB6Q9NP58 842 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 DPP3Q9NY33 737 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 SUSD2Q9UGT4 822 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 GTF3C4Q9UKN8 822 aa16.58■□□□□ 0.24
LIG1-214ENST00000597146 SPTA1P02549 2419 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 A0A0A0MRY4 1105 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 A0A0B4J269 797 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 NPHP3-ACAD11A0A0J9YXS1 232 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 A0A1W2PQF6 199 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 CD2BP2O95400 341 aaKnown RBP16.57■□□□□ 0.24
LIG1-214ENST00000597146 TNFRSF4P43489 277 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 ACOT2P49753 483 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 NCKAP1LP55160 1127 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 USP46P62068 366 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 SV2CQ496J9 727 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 RILPL1Q5EBL4 403 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 SLC39A4Q6P5W5 647 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 DTHD1Q6ZMT9 781 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 PDCL2Q8N4E4 241 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 ZCCHC9Q8N567 271 aaKnown RBP16.57■□□□□ 0.24
LIG1-214ENST00000597146 IGSF22Q8N9C0 903 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 ZNF419Q96HQ0 510 aaPredicted RBP16.57■□□□□ 0.24
LIG1-214ENST00000597146 TIPINQ9BVW5 301 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 PRORYQ9H606 182 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 DDX43Q9NXZ2 648 aaKnown RBP16.57■□□□□ 0.24
LIG1-214ENST00000597146 FNDC3AQ9Y2H6 1198 aaKnown RBP16.57■□□□□ 0.24
LIG1-214ENST00000597146 DERAQ9Y315 318 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 CPQQ9Y646 472 aa16.57■□□□□ 0.24
LIG1-214ENST00000597146 TBC1D3BA6NDS4 549 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 ADH1CP00326 375 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 GNSP15586 552 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 ZRSR1Q15695 479 aaKnown RBP16.56■□□□□ 0.24
LIG1-214ENST00000597146 LY6G5CQ5SRR4 150 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 C10orf76Q5T2E6 689 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 OSTM1Q86WC4 334 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 NAT16Q8N8M0 369 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 MMTAG2Q9BU76 263 aaKnown RBP16.56■□□□□ 0.24
LIG1-214ENST00000597146 RNF38Q9H0F5 515 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 GAREM1Q9H706 876 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 CD248Q9HCU0 757 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 CFAP97Q9P2B7 532 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 L1RE1Q9UN81 338 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 C2CD2Q9Y426 696 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 PCDHB6Q9Y5E3 794 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 COL6A6A6NMZ7 2263 aa16.56■□□□□ 0.24
LIG1-214ENST00000597146 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.55■□□□□ 0.24
LIG1-214ENST00000597146 TISP43B9A030 160 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 J3QKU1 62 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 LAD1O00515 517 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 TRIM24O15164 1050 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 NDUFS2O75306 463 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 CILPO75339 1184 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 ZNF217O75362 1048 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 PIGRP01833 764 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 PDCP20941 246 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 PDE6CP51160 858 aa16.55■□□□□ 0.24
LIG1-214ENST00000597146 SLC7A9P82251 487 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms